Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3255 |
Symbol | |
ID | 4581817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 418832 |
End bp | 419227 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639770577 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_917030 |
Protein GI | 119385975 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.162447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.118949 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATCG TCAAAGCCGG AAGCCAGCCG TCCTTCATCG GGCCGGCGGA CCATTTCACC GGGCGCGTCC GCGTCGATCC GGTGTTCAGT TGCGAGGCCC CGGCTCGCGC CAAGGGTGCG AAGGTGACCT TCGAGCCCGG TGCCCGCACC CACTGGCACA CCCATCCGCT GGGCCAGACC CTGATCGTCA CGCAAGGATG CGGCCATGTC CAATGCTGGG GCGGTCCGGT CGAGACGGTG ACCGAAGGCG ACTGCATCTG GTTTCCGCCC GGCGAAAAGC ACTGGCACGG CGCCAGCGCT ACTACCGCCA TGACGCATCT CGCGGTGTCC GAACCGCTGG ATGGCGTAAG CGTGGCATGG ATGGAGCCGG TCGGCGACGA CGACTACCCC GGCTGA
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Protein sequence | MRIVKAGSQP SFIGPADHFT GRVRVDPVFS CEAPARAKGA KVTFEPGART HWHTHPLGQT LIVTQGCGHV QCWGGPVETV TEGDCIWFPP GEKHWHGASA TTAMTHLAVS EPLDGVSVAW MEPVGDDDYP G
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