Gene Pden_3245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3245 
Symbol 
ID4581809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp410491 
End bp411477 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content63% 
IMG OID639770569 
Producthypothetical protein 
Protein accessionYP_917022 
Protein GI119385967 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.411492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA CCAAGATCAG CGACTTCACC CCTGTTTATC GGGGCGCGAT CACCGCGAAT 
GAATCGGGCA AGGTCAACGT CCACCCGGTC ACATACAAGC TGCATGGCCT GGATATTGCC
GCGAACGTCT ATACCCCGGC GGGTTACGAC CCGAGCCAGA AATACCCCGC CATCGCCGTG
GCGCACCCCA ATGGCGGCGT GAAGGAGCAG ACCGCCGGCC TCTATGCCCA GCACCTTGCC
GAACAGGGCT ACATCACCAT TACCGCCGAT GCGTCCTATC AGGGTGCCAG CGGCGGCGAG
CCGCGCAGCG TGGACAAGCC CTCGAACCGC ATCGAGGACA TTCACGGCAT GGCCGATTTC
ATCACCCAGT ATCCCGGCGT CGATGCCCGG CGTCTGGGCC TGTTCGGTAT CTGCGGCGGC
GGCGGGTATT CGCTGGCGGC GGCAAAGACC GACAAGCGGT TCAAGTCGGT CGCGACGCTC
AGCATGTTCA ACTCGGGCCG CGTGCGCCGC AATGGGTTCG CGGATTCGGC CCTGGACAGC
ATCCAGCAGC GGCTTCGGCA AGCGTCGGAG GCCCGTGCGC AGGAGGTGGC CGGTGGGAAA
ATCCTCTATG CCGGTGACGC CGACATGACC GATGAGCAGA TCGCGGCGCT GCCGTTCGAG
ATGTATCGCG AAGGCTACAT GTATTACTGG CGGACGCACG CCCATACCGG CTCGACCTTC
AAATACACGA TGAGCAGCCT GCTCGACCTG ATGCGGTGGG ATGCCACCGA CCAGATCGAA
CTGATCGACC AGCCCTTGCT GATGATCGCC GGCAGCAAGG CCGATAGCCT CCATATGTCC
GAAGATGCCT TTCCCAAGGC CACTGGCACC GAGGACAAGG AGCTGTTCCT GATCGAAGGG
GCCTCCCATA TCCAGACGTA TTGGGTTCCC GAATATGTGG CGGCGGCGAT GGGCAAGCTG
ACGCCGTTCT TCGCGCGGAC CCTCTAA
 
Protein sequence
MNDTKISDFT PVYRGAITAN ESGKVNVHPV TYKLHGLDIA ANVYTPAGYD PSQKYPAIAV 
AHPNGGVKEQ TAGLYAQHLA EQGYITITAD ASYQGASGGE PRSVDKPSNR IEDIHGMADF
ITQYPGVDAR RLGLFGICGG GGYSLAAAKT DKRFKSVATL SMFNSGRVRR NGFADSALDS
IQQRLRQASE ARAQEVAGGK ILYAGDADMT DEQIAALPFE MYREGYMYYW RTHAHTGSTF
KYTMSSLLDL MRWDATDQIE LIDQPLLMIA GSKADSLHMS EDAFPKATGT EDKELFLIEG
ASHIQTYWVP EYVAAAMGKL TPFFARTL