| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3202 |
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| Symbol | |
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| ID | 4581766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 366385 |
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| End bp | 367428 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639770526 |
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| Product | conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_916979 |
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| Protein GI | 119385924 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.243978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAA TTCGCTTCGA ACGATTGGTT GGCGACAGGA CGGGATCGCT GAGCAAATCC
GCAATCCTTC CTGTCGTGGT ACTCGCGATG ACCACACTCG CCGGCTGCGC CACGACCAAA
ACGCCACAGT TCAGCTATGA CGACCACGTG CCGCCATTGC CATCGCCGCC CGCCGCCGTT
GCCGATCCGG CTCCGGAACC GCTGCATGTG CCGCCGGACT GGACCCCGGC GAAGGGTGGG
AATGCAGCGG AAAGCCCGGC AGGCCAGGTT ACGAACGCCA ACCTCGCCGC CCGGGTGGAG
CCGCGCCGGG AGGGCTATTA CAACGCCATC CAGGTCTATC CGTGGAGCGA AGGCGCGCTC
TATCAGATCT ATGCGGCGCC GGGGCAGATC ACCGATATCG CGCTGGAGCC GGGCGAGCGC
CTGACCAGCA CCGGTCCCAT CGCCGCAGGC GACACCGCCC GCTGGATCAT CGGCGATACG
GAGAGCGGCA GCGGCGCGTC CCGCCGCGTG CATGTGCTGG TCAAGCCGAC CCGGCCCGAG
ATCAGCACCA ATCTGGTCAT CGCCACCGAC CGGCGCCGCT ACATGCTGGA ATTGCGCGCC
GACGAAGAAA CCTGGATGCC GGCGGTGTCG TGGCATTATC CGGAAAGCGC GTCTGCGGCC
GCACAGCGTC GCGCGGCTCC TGCCGCGCCG GTGATTCCGG GGAAGGCTGC GCGCAACCAT
CGCTACGGCT TGCAGGTCCT AGGCGCGAGC CCGCCCTGGC GCCCGGTCTC GGTCTTCGAC
GACGGCCGCC GGGTCCATGT GGTCTTCCCG CCCGGCATCG CCCAGGGCGA GATGCCGCCC
CTCTTTGTCA TCGGCCCGGA CGGCGCCCCC GAGATCGTCA ACAGCCGTGT CCACGGCAAT
GTGCTGATCG TGGACCGGCT CTTCGGCGTG GCCGAACTGC GCCTCGGCTC GGGAAAACGC
CAGCAGGTGG TCAGGATTAT CCGTATGGAA CAGACACGGG CGGCCATCCA GCCGACCCGT
GCGCCGACGA AAGGATCGTC CTGA
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| Protein sequence | MTAIRFERLV GDRTGSLSKS AILPVVVLAM TTLAGCATTK TPQFSYDDHV PPLPSPPAAV
ADPAPEPLHV PPDWTPAKGG NAAESPAGQV TNANLAARVE PRREGYYNAI QVYPWSEGAL
YQIYAAPGQI TDIALEPGER LTSTGPIAAG DTARWIIGDT ESGSGASRRV HVLVKPTRPE
ISTNLVIATD RRRYMLELRA DEETWMPAVS WHYPESASAA AQRRAAPAAP VIPGKAARNH
RYGLQVLGAS PPWRPVSVFD DGRRVHVVFP PGIAQGEMPP LFVIGPDGAP EIVNSRVHGN
VLIVDRLFGV AELRLGSGKR QQVVRIIRME QTRAAIQPTR APTKGSS
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