| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3194 |
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| Symbol | |
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| ID | 4581758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 359010 |
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| End bp | 360014 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639770518 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_916971 |
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| Protein GI | 119385916 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.653362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGTT CGGACCACAT CGAGGCAAGG GTGGAGCGCG GTGCCCGCAT GCTCCGCACC
GCGCTCGGAC CTGCCATCTC CGCCCTTTTG CGGGATCCCG ACATCGTCGA GGTTATGCTG
AACCCGGACG GCCGGATCTG GGTGGATCGG CTGCGCGACG GGCTCGCCGA TACCAACCAA
GTCCTGTCCG CATCCGACGG CGAGCGTATC ATCCGGCTGG TCGCGCATCA CGTCGGCGCC
GAGGTCCATG CGCACAATCC CCGCGTCTCG GCTGAGCTGC CGGAAACGGG AGAACGCTTC
GAGGGGCTGC TGCCGCCGGT CGTCGCCGCG CCCGCCTTCG CCATCCGCAA GCCCGCCGTC
GCCGTCTTCA ACCTCGACGA TTATGTCGAC ACCGGCATCA TGACCCGGAT GCAGGCCGAG
GCGTTGCGTC TCGCAGTCGC GACCCGCGCC AATATCCTCG TCTCGGGCGG CACCTCCACC
GGCAAGACCA CGCTGACCAA TGCGCTGCTG GCCGAGGTGG CAAAGACGCA GGATCGCGTG
GTCATCATCG AGGACACCCG CGAGCTGCAA TGCGCCGCGC CCAATCTGGT GGCGATGCGC
ACCACGGACG GCGTCGCCAC CTTGTCCGAT CTGGTGCGCT CCTCGCTGCG GCTGCGTCCC
GACCGCATCC CCATCGGCGA GGTGCGCGGC GCCGAGGCGC TCGACCTCCT GAAAGCCTGG
GGCACCGGCC ATCCGGGCGG CATCGGCACC ATCCATGCCG GATCCGGCAT CGGCGCCCTG
CGCCGCCTCG AACAGTTGAT CCAGGAAGCC GTGATCACCG TGCCCCGTGC CCTGATCGCC
GAGACCGTGG ATATCGTCGC CGTTCTGTCC GGACGCGGGT CCGCGCGGCG GCTGGCCGAA
CTGGTCCGCG TCGAGGGCCT CGGCCCGGAC GGCGACTACC GCATCGCTTC CGTCATTTCC
GATACCGACA CGTATATCGC AGAAAAAGCT GGAGAACCCG AATGA
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| Protein sequence | MAGSDHIEAR VERGARMLRT ALGPAISALL RDPDIVEVML NPDGRIWVDR LRDGLADTNQ
VLSASDGERI IRLVAHHVGA EVHAHNPRVS AELPETGERF EGLLPPVVAA PAFAIRKPAV
AVFNLDDYVD TGIMTRMQAE ALRLAVATRA NILVSGGTST GKTTLTNALL AEVAKTQDRV
VIIEDTRELQ CAAPNLVAMR TTDGVATLSD LVRSSLRLRP DRIPIGEVRG AEALDLLKAW
GTGHPGGIGT IHAGSGIGAL RRLEQLIQEA VITVPRALIA ETVDIVAVLS GRGSARRLAE
LVRVEGLGPD GDYRIASVIS DTDTYIAEKA GEPE
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