Gene Pden_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3171 
Symbol 
ID4581735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp342906 
End bp343163 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content61% 
IMG OID639770495 
ProductXRE family transcriptional regulator 
Protein accessionYP_916948 
Protein GI119385893 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.83484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATTC GGGAGATATT CGCGCACAAT CTGCGGGCCG CGCGGCAAGC CAGAGGCTTG 
TCGCAGGAAG AGCTCGCGCA TCGTGCGGAT ATCGATCGAA CCTATATCAG CTCACTGGAG
CGCCGCGTTT ACGGCGCCAG CATCGATGTC GTGGATCGCC TGGCCTCGGT CCTGGAAATG
GAAGCGTCCG ACCTGCTTAA GCGGCCTACG GTAGGCAACC GGCTGCCATC TGCGGAGCCG
CCAAAGCCTG ACAAGTAG
 
Protein sequence
MEIREIFAHN LRAARQARGL SQEELAHRAD IDRTYISSLE RRVYGASIDV VDRLASVLEM 
EASDLLKRPT VGNRLPSAEP PKPDK