Gene Pden_3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3150 
Symbol 
ID4581714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp327688 
End bp328374 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content66% 
IMG OID639770474 
Productprotein of unknown function DUF899, thioredoxin family protein 
Protein accessionYP_916927 
Protein GI119385872 
COG category[S] Function unknown 
COG ID[COG4312] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.3957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG CCATCGTTTC CCGCGATGAG TGGCTGGACG CCCGCAAGGC GCTGCTGGCC 
CGCGAACGCG ACATGACCCA CCAGCTCGAC GCGCTGCGCG CCGAGCGGCG GCGGATGCCC
TGGGTCCGCA TCGACAAGCC CTATCGCTTC GACGGTCCCG ACGGCGAGAT GACGCTGGGC
GATCTGTTCG GGACCCGCAG CCAGCTTGCC GTCTATCACT TCATGCTGAC GCCGGGATCG
GAGCATCTCT GCTCGGGCTG TTCCTTCGTC GCCGATCATG TCGATGCCGC CCGGCAGCAT
TTCGAGCAGG CGGACCTGGC CTTCGCCGCC GTCTCGCGCG CGCCGGTCCC GCAGATCGAG
GAGGTCCTCC GGCGGATGGG CTGGCGCTTT CCCTGGCTGT CTTCGGGAGA CGGCGATTTC
AACTACGATT TCGGCGTCTC GTTCACGGAA GAGGACCGCG CCGCCGGCCG GGCGATCTAC
AATTACGGCA CGGTGATCAG GAACAGCCCG GACATGTTCG GGGTCAGCAT CTTCGTGCGG
CAGGACGGCG CCCTCTTCCA CAGCTATTCC ACCTATCACC GCGGCGTGGA ACTGCTGATG
GGCGCGTTCA ACTGGCTGGA CCTCACCCCC AAGGGCCGCA ACGAGAACGG CGCCATGAGC
TGGCTCAGGC TGCATGACGA ATACTGA
 
Protein sequence
MTQAIVSRDE WLDARKALLA RERDMTHQLD ALRAERRRMP WVRIDKPYRF DGPDGEMTLG 
DLFGTRSQLA VYHFMLTPGS EHLCSGCSFV ADHVDAARQH FEQADLAFAA VSRAPVPQIE
EVLRRMGWRF PWLSSGDGDF NYDFGVSFTE EDRAAGRAIY NYGTVIRNSP DMFGVSIFVR
QDGALFHSYS TYHRGVELLM GAFNWLDLTP KGRNENGAMS WLRLHDEY