Gene Pden_3128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3128 
Symbol 
ID4581692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp311064 
End bp312305 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content50% 
IMG OID639770452 
Producthypothetical protein 
Protein accessionYP_916905 
Protein GI119385850 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.178962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC TTAAAGTTGC ACTCATTTCT CTCCGCGATG TCCTAGTGAG GAAGAAGCTG 
GAAAAAGAGC CGTTGGTGGA AGCAATCAAG CTATTGCAGT TCCTGGCAAA GTCTGGTGTT
CAGATAGCGA TGGTAAGCAA CTCTAATTGG GTGATGACCG ATACCCAAAA GCCATTCACC
GATTTCCTTC AAGAGGCGGC AGGCTTAAAA ATACCTCTGC ACATCAAAGG TGTCGATTTT
CGGGCCAAGC AAGATTCAGG TGCCATGGCT GATGTGCTCA AAAAGTATGG AGCTACGCCT
CAAGAGGCAG TTTACATTGG TTCAACCGAT GAGGACATGC AGGCCACACG AAATAGCGGT
GTGCTTTTCC TGAATGCAAA GTGGTATGCT GACAACTCGC CCTATGGTTT TGAGTTCGCT
TCTGCGCTCG ATATTGCAAG GTTTATAGAT TGTTGCTGTC TGCGACCAAA GGACTGGTTC
TGGAAACACG AGTTTGACGG GTTCAGAGTT CTATCCATTG CACCTCTTGC TGAGGTCTCC
AAGCGCTATC CTGAGGGCGC AAAGTACTCA ACCGATGCCA AAGCCGCTGC AAAGTTCAGT
AGAGGGGACC TTCGCTACTG GGGCCTCCTA ATGGCCTCGC GGATCCATTT TTCAGGCATT
GGGGCGGAGG TTGATTATGT CTGCCCATAT CCAGGACATA GGACGGACTC GCCCAAGGGA
CTTCTTACAA ATGCTCTTAA GATCGTCGCA GGCTCGCTGA AGGCTCAGTA TCTGGATGAC
CTGTTGGTGC GACACGCATC AGCGGAAAAA TCACAGGCAA TCCGAAATAG CGGTCGGCAG
CCAACACCAG AGAATCAGTT GAAGACCACC AGGCTTCGGA AGGACCCTGT TAGAACCGGA
AAACTAGCGT TACGCTACAA GAGCCCTCCA CTACGTGCGG GAAAGAAGGT CCTAATCGTT
GACGATATTT GCACTCAAGG TCATTCTTTT GAGGCGGCTC GACTTTTCGT TCAATCCACT
GGGGCTGATG CAATCGGGAT TTCTTGGCTC AAGACCCCTG GTAACGATTA CTCGCGTGTT
TCATTCGTTG ACCCGGCGAT CAAGAGCCCA TACCTTCCAT ATTCCCCGGT GAAGGTCCGT
ACGATCCCGC ATTCCTTTAA CGCTGGAATC GTGAACAACC TGGCAGCACA AGAGATTGGT
GACGCATTTC AGGCCTATGG GACTTGGGTT TGGCCAACTT GA
 
Protein sequence
MKTLKVALIS LRDVLVRKKL EKEPLVEAIK LLQFLAKSGV QIAMVSNSNW VMTDTQKPFT 
DFLQEAAGLK IPLHIKGVDF RAKQDSGAMA DVLKKYGATP QEAVYIGSTD EDMQATRNSG
VLFLNAKWYA DNSPYGFEFA SALDIARFID CCCLRPKDWF WKHEFDGFRV LSIAPLAEVS
KRYPEGAKYS TDAKAAAKFS RGDLRYWGLL MASRIHFSGI GAEVDYVCPY PGHRTDSPKG
LLTNALKIVA GSLKAQYLDD LLVRHASAEK SQAIRNSGRQ PTPENQLKTT RLRKDPVRTG
KLALRYKSPP LRAGKKVLIV DDICTQGHSF EAARLFVQST GADAIGISWL KTPGNDYSRV
SFVDPAIKSP YLPYSPVKVR TIPHSFNAGI VNNLAAQEIG DAFQAYGTWV WPT