| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3096 |
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| Symbol | |
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| ID | 4581660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 280745 |
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| End bp | 282994 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639770420 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_916873 |
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| Protein GI | 119385818 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTGC CGACCATGGA ACAGGGCTTC GCCATCCGGG TGCGCGGGCA GGTGCAGGGG
GTCGGCTTCC GGCCCTTTGT CTGGCGGCTG GCGCGGGCGG CAGGGTTGCG CGGCGAAGTT
CTGAACGATG CCGAAGGGGT CCTGATCCGT CTGGTCGCGC AGGATTGCGG CGACTTCATC
GCGGCCTTGC GCGCGGATAG GCCGCCTCTG GCCAGAATCG ACGCGATCGA GGCCGTGCCA
CAGGTTTTTG CCGCGATGCC CGAGGGGTTT TCCATCGTGG CCAGCACGGG CACAGGCGCC
GAAACGCGGG TCACGCCCGA TGCCGCGACC TGCCCGGAAT GCCGGGCTGA GGTCTTTGCG
CCCGGTAGGC GGCAGGGCTA TGCCTTTACC AACTGCACCC ATTGCGGGCC GCGCTATACG
ATCCTGCGCG AACTGCCCTA TGACCGGGCG CGAACCACGA TGGCGGGCTT TGATCTTTGC
CCCGATTGTG CCGCCGAATA TGCCGATCCC GCCGACCGTC GCTTTCACGC GCAACCCATC
GCCTGCCCGG CCTGCGGCCC AAACCTGTGG TATGAGGCCG GGGGAAAAGA GGTCGCGGGC
GATCCGGTCG CATTGGCGGT GGCGGCGCTG AAGGCGGGGC AGGTCGTCGC GGTCAAGGGG
CTGGGCGGCT TTCACCTTGC CTGCGATGCG GCCGATGCCA GGGCCGTGGC GCTGTTGCGG
GCGCGCAAAA GGCGGCCGTC GAAGCCCTTT GCCCTGATGG GGACCGAGGC GATGATCTGC
GCCCATGCGA CGCCGTCCGA GGCTTGCTGG CGATTGTTGC GCGACCCGGC GGCGCCGGTG
GTGCTGGTGC CCGCCCGGGG CACATTGCCC GAGGATGTGG CGCCGGGGAT GCGCGCGCTT
GGCGTCATGC TGCCCTATAC GCCTCTGCAT CACCTGCTGA TTGCCGCTTT CGGGGGGATG
CTGGTGATGA CCTCGGGCAA TCTTTCGGGC GCCCCGCAGG TCACCGGCAA TGACGAGGCG
CGCAAGGCGC TGGCGCGCTT TGCCGATGGT TTCCTGATGC ACAACCGCGA GATTGCGCGG
CGGCTGGATG ACGGGGTCGA GCGCGCCGAT CCGCCAATGG TGATCCGCCG CGCCCGTGGG
CGGGTGCCGG GCACGCTGCC CCTGCCGCCG GGGTTTGACG GAGCGCCTCG GGTGCTGGCC
TTTGGTGGTC AGATGAAGGC GGCGATCTGC CTGACCAAGA ACGGTCAGGC GATGGTGTCG
CAGCATCTGG GCGATCTGGA CGATGCCGAG ACCGCGCTGG AATACGACCG CACCCTGCGC
GATCTGGCGG CCCTGTTCGA CCATGCCCCC GAACTGGCCG CCTGTGACCC GCATCCGGGC
TATCGCGCCA CGATAGCGGC CGAAGGCGCG GGCCTGCCGC TGATCCGGGT CTGGCACCAT
CATGCGCATC TGGCCTCGTG TCTTGGCGAT AATCTCTGGC CACTGGACGG CGGCAGGGTG
GCGGGGATCG TGATGGACGG GCTTGGCCTT GGACCGGAAG GCGCGATCTG GGGCGGCGAG
GTGTTGCTGG GCGATTATAC CGGGTTCGAG CGCGTCGCGC ATCTGGCCCC CGCCCCCTTG
CCGGGCGGCG ACAGCGCCAG TCGAGAGCCC TGGCGCAATG CGCTGGCGCG TCTGGATCAG
GCGGGGCTTT CAGCCGTGGC GGATCGGCTT TTCCCGGCCG CGCCCCGCGC TCTTCTGCGG
CAGGCGGCCC GTGCGGGGGT GAATGCGCCA CAATCATCCT CGGCCGGGCG GCTGTTCGAT
GCCTTTGCGG CGCTTGCGGG CTTTGCCGGG GCGCAGAGTT ACGAGGGCGA GGCCGCGATG
CGGCTGGAGG CCATGGCGTG CCCTGCTTCG CCCTATCCGT TTGACTGCCG GGATGGGGGG
GTGATTGACC CCGCGCCGAT GTTTCGCGCC GCCGCCACCG ATCTGGCGGC AGGGCGCGAT
CCGGGCGAAA TGGCGGGGGC CTTTCATGCC GGGCTGGCGC GTGCCTTCTG CGCGCCGGCC
CGCGCGCTGG TCCAGAGCGG CAGAGCGCAG GCGGTGGCCC TGTCGGGCGG TGTGCTTCAG
AATGCTTTCT TTTTGCGCGA ATGTCTGGCG GCGCTGGATG GTCTGCCGGT CTTGCTGCAT
CGCCAGATAC CGGCCAATGA CGGAGGGCTT GCTTTCGGTC AGGCTCTGGT TGCTGCGGCG
CAGCATATGG CTGCGGCGAA AAGCTTGTAA
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| Protein sequence | MTLPTMEQGF AIRVRGQVQG VGFRPFVWRL ARAAGLRGEV LNDAEGVLIR LVAQDCGDFI
AALRADRPPL ARIDAIEAVP QVFAAMPEGF SIVASTGTGA ETRVTPDAAT CPECRAEVFA
PGRRQGYAFT NCTHCGPRYT ILRELPYDRA RTTMAGFDLC PDCAAEYADP ADRRFHAQPI
ACPACGPNLW YEAGGKEVAG DPVALAVAAL KAGQVVAVKG LGGFHLACDA ADARAVALLR
ARKRRPSKPF ALMGTEAMIC AHATPSEACW RLLRDPAAPV VLVPARGTLP EDVAPGMRAL
GVMLPYTPLH HLLIAAFGGM LVMTSGNLSG APQVTGNDEA RKALARFADG FLMHNREIAR
RLDDGVERAD PPMVIRRARG RVPGTLPLPP GFDGAPRVLA FGGQMKAAIC LTKNGQAMVS
QHLGDLDDAE TALEYDRTLR DLAALFDHAP ELAACDPHPG YRATIAAEGA GLPLIRVWHH
HAHLASCLGD NLWPLDGGRV AGIVMDGLGL GPEGAIWGGE VLLGDYTGFE RVAHLAPAPL
PGGDSASREP WRNALARLDQ AGLSAVADRL FPAAPRALLR QAARAGVNAP QSSSAGRLFD
AFAALAGFAG AQSYEGEAAM RLEAMACPAS PYPFDCRDGG VIDPAPMFRA AATDLAAGRD
PGEMAGAFHA GLARAFCAPA RALVQSGRAQ AVALSGGVLQ NAFFLRECLA ALDGLPVLLH
RQIPANDGGL AFGQALVAAA QHMAAAKSL
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