Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3056 |
Symbol | |
ID | 4581620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 236056 |
End bp | 236769 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639770380 |
Product | ABC transporter related |
Protein accession | YP_916833 |
Protein GI | 119385778 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.691654 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGATG AACTTGTGAT CTCGCATCTG ACCGCCGGCT ATGGCCATCA GTCTGTCCTC CAGGATCTGA GCTTGCGGGC AGAGGCGGGC CGGCTGACCG CCCTTATCGG GCCCAATGGC CATGGCAAGA CCACGCTCTT AAGAGCGATT TCCGGGCTGA TCCGGCCGAA GTCCGGTGAA ATCCGCCTCG GGGCGGAACG GATTTCCGGG CTGGGCGCCG AAACCATCGT CGCGCGCGGG ATTGTCCATG TGCCACAGGG CGATTTGCTC TTTCCCGATA TGACGGTTCT GGAAAACCTG CGCATGGGCG CCTTTCTACC TGCGGCCGCC AGGCAGGAAA AATCCGTGCT GGAGGAGGTC TTCACCCTCC TTCCGAAATT GCGCGACCGT CAGAGCCAGA TTGCGCGCAC TTTGTCGGGC GGCGAGCGGC GGATGGTTGG CATCGGGCGC GGGCTGATGG CCTCGGGGCG GGTGCTGATG CTGGATGAGC CCTCGCTGGG GCTGGCCCCC ATCGTCATTG AGCAGATTTA CGAAGTCATC GCGGGTCTGC GCCGCGCCGG GCGCAGCATT CTCCTCGTCG AGGAAAACGC CATGCGGGCC GCTGTCATCG CCGATCAGGT GCATCTGCTG GACCATGGCA CTCTCGCCTG GAGCGGCACC GGCGCTGAGC TTTCGGGCCG ATCCGAGCTT CTTGAAACCT ATCTGGGGGT ATGA
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Protein sequence | MPDELVISHL TAGYGHQSVL QDLSLRAEAG RLTALIGPNG HGKTTLLRAI SGLIRPKSGE IRLGAERISG LGAETIVARG IVHVPQGDLL FPDMTVLENL RMGAFLPAAA RQEKSVLEEV FTLLPKLRDR QSQIARTLSG GERRMVGIGR GLMASGRVLM LDEPSLGLAP IVIEQIYEVI AGLRRAGRSI LLVEENAMRA AVIADQVHLL DHGTLAWSGT GAELSGRSEL LETYLGV
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