Gene Pden_3033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3033 
Symbol 
ID4581599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp209564 
End bp210601 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content63% 
IMG OID639770359 
Productperiplasmic binding protein 
Protein accessionYP_916812 
Protein GI119385757 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGGA TCCGGCATCT GGCCACGTGC ATCGCCTGTG CAGTTGCCCT TCTGTCCCAA 
CCCGCATCGG CCGAGATCAT GCGCGAGGTG GTCTATTACG GCGACCGATC CGTCAGCCTG
CCGCCCGAGA TCGATCGGAT CGCCACGAAT TGGGAGGCGC AGAACTCGAT CCTGACCATG
CTCGGCTATG GCGACCGCAT CGTCGCGACC ACGCGCATCG CGCGCTCGAT GCCGCTGATG
CAAAAGTTCG TGCCCTCGAT CAAGGCTGCG GCGCTGACCA CGCTCGGCGA CGGCACCGTC
AATGTCGAGG AGCTGATGGT GCTGAAGCCG GACATCCTGT TTTCCTCGCG TGCGTTACCC
GACGCTGTTT CCAGGCAGCT TCGGGGGGCG GGCATCGCCG TGGCGTCCTT TCGCAGCAAT
TCCATCGACG CGCTGGTCGA GCGCGTGTTG ATCACCGGCG AAATGCTTGG GCCGGATGCG
CTTGAAGTCG CCAGGAGGTA CCAAGGCTAT TTCGACGACA ACCGCCGCCG CGTCGCCGAG
CGGCTGGAAG GCATCCCGCC CGATCGGCGC GTGAGGGTCT ACCTGGCCTC GGGCGCGCCG
CTTTCGACCT CGGGACGACC GTCGCTGAAC CAGGACTGGA TGGATCTGGG CGGGGCGATC
AATATCGCGG AAAGCTGGTT CGGAGACATG CCCTATGCCT CGGGCATTGC CTCGCTTGAG
AATATCATCG CCGGAAACCC TGATGTCATC ATCTCGATGA ATGCCGAGGA CGCCGAGGAA
ATCCGCACCA ACCCGCAATG GCGCAACGTC AAGGCGGTGC GCGAGGGCCG GGTCTACGCC
AATCCGCGCG GGCTGTTCTG GTGGTGCCGG GAAACCTCGG AAGGGGCGCT TCAATTTCTT
TGGCTGGCCA GCACGCTTTA TCCCGACGCT CTTGCCGATA TCGACATGCG CGAGGAAACC
CGGCGTTTCT ATCGCAAATT CTATCGCATC GAACTGACCG ACAACGAGAT CGCCGAGTTC
CTGAAGCCGA CATACTGA
 
Protein sequence
MFRIRHLATC IACAVALLSQ PASAEIMREV VYYGDRSVSL PPEIDRIATN WEAQNSILTM 
LGYGDRIVAT TRIARSMPLM QKFVPSIKAA ALTTLGDGTV NVEELMVLKP DILFSSRALP
DAVSRQLRGA GIAVASFRSN SIDALVERVL ITGEMLGPDA LEVARRYQGY FDDNRRRVAE
RLEGIPPDRR VRVYLASGAP LSTSGRPSLN QDWMDLGGAI NIAESWFGDM PYASGIASLE
NIIAGNPDVI ISMNAEDAEE IRTNPQWRNV KAVREGRVYA NPRGLFWWCR ETSEGALQFL
WLASTLYPDA LADIDMREET RRFYRKFYRI ELTDNEIAEF LKPTY