Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3029 |
Symbol | |
ID | 4581595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 204776 |
End bp | 206932 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639770355 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_916808 |
Protein GI | 119385753 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGCG CAGTTTCGAA TGGTGGGATA GCGATTTCTT TTTTCTGCCT GGCCACAGCA GGTCATGCGC AGACGCTGCC CAGACAGGAC GCCATCGTTC TTGACCAGGT CGTCATCCAG GGGGGCGACG ACAGCGGCAA GAGCGGGGTG CGCGCGAAAA CCGCGACGAT TGGTCCGCTT GGCCGGCGCG AGATCAAGGA CACGCCCTAT TCGGTCAGCG TCATCGACAA GACGCTGATT GAAAACCAGC AGGCGACAAC CTTGCCCGAT CTGTTGAAAT ACATGCCCTC GACGCAGATG GAGGCGCGCG GCGGCGGCGA TGTCGGGCGT CCGCAATCGC GCGGCATGCA GGGCACGCCG GTTTTCAACA ATCGCCTCGA TGGTATGAAC ATCGTCGCCA CCACTGCGCA GCCCATCGAG ATGTATGAAA GGGTCGAGGT CGTCCACGGC CTCGCCGGCG CCTATTTCGG CCCGGCAAGC CCCGGCGGAC TTTTCAACTT CACCCGCAAA CGGCCCACGC AAGATCCCTA TAATCGCATC AACACCGGCT TTACCGGCAA GGGGACCTGG CTGGCGCATG GCGATTTCGG CGGCCATGCG GCAGACGGCA TGCTCGGCTA TCGCATCAAC GTGCTGAGCG AAGAGGGAGA CGGCTATGTG AAGGGCAGCG ATCTGGATCG CTCGCTGATC AGCGGCGCCT TCGACATCAA CCTGACCGAC CAGACGACAA TAGAACTGAA CGCCAGCCGC TACCGTTTCG ACAAGTTCGG CTTTCCCGGC AGCTTCAGCT ACGACAACAG CGTGACCCTG CCCGATGCGC CGGATCCGAC CAAGGTCGGC TACGGTCAGA AATTCGCCGG CTACGGGCTG GAGGACACGC TGGTCGGCGG CCTCGTCAAG CATCGGTTCA ACGAGGATTG GTCCTTGACC GCCGGGATGC AGCATCAAAG GGTCAGCCGC TGGTTCGTAT CTGTCTCGAA CGCGCTTCTG GACGACGACG GCAATTATAG CAACAGCATC GATGGCGGGG TCAGCGGCCA GTTCCGGGTC ACCAGCAATA TCGCCGTGCT CAACGGCACG CTGTTCACCG GCGGGGTCAA ACACGACGTC CATCTGGGCA CGACCGGCGT GAACTGGGAA AACTACAGCC CCCGCAGTGG CAATCCGAGC GTGCAAGGCT ATCTTGGCGA TGCCAGCATC GACAATCCGG TCCAATGGGA CGCCCCGACG GGTCTGGTGC GCAACGGGCC GCGCTACAGA TCCTTCAGCA ACAGATCGCA AAGCCTGGTG TTGGGTGACA GCATCACCTT CAACGGGCAG TGGTCGGCCA TCCTGTCGGG CAGCTACACT TGGTTCGACG TCAAGAACTA TGACGAAACC GGCACGGTCA CGCAGAAATA CAGCGAGCGG GGTTTAAGCC CCAGCGTGGC GCTGAGCTAC AAGCCCGCCG AAAACATCAC CACCTATGTC GCCTATGTCG ACACGCTGCA AAGCGGCGGT ACCGCGCCGA CCACGGCCGC GAACGCCGGA CAGGTGCTCG CGCCCGAGCG CAGCAAGCAG GTCGAGGCTG GGGTCAAGGC CGACCTAGGC GGCCTGGATG CTTCGGTGGC GGTGTTCCGT ATCGAGCGAC CCTTTGCTTT CACCGGCGAG GACAATGTCT ATCGCATCCA GGGCGACCAG GTGAACAAGG GGATCGAACT GGAACTGCGC GGCCAACTGC TGGAAAACCT CAATATCCAT GGCGGCGTCA CCCTGCTTGA TCCCAAGCTG AGGAATACCG GCAACCCGCT GACCAGCGAT ACCGATGTGG TGGGCGCGCC CAAGGTGCAG GCCAACCTGT TCATGGAATA TTTCTTCAAG AGCCTGCCCG AGCTTTCGGC CAGCGCCAAT CTGCACTTCA CAGGCAAGCG TGCGGGCAAC AACATCAACA GCTTCAAGGT CGACAGCTAT GCCACCCTGG ATCTTGGGCT GCGCTACGAA CGCCAGATGA CCAAGGATAC CACCGCGGTC TTCAACCTCG CGATCAACAA CGTCTTCGAT GAGCATTACT GGGCATCGAT CTTTCCCGGC AGCATCGATG GCGCGACGCG GGGCGCGAAC AGCGCCTTTC TGGGTGCGCC CCGCGAGGTC AGGCTCTCGG CCAGCTTCAA GTTCTGA
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Protein sequence | MRRAVSNGGI AISFFCLATA GHAQTLPRQD AIVLDQVVIQ GGDDSGKSGV RAKTATIGPL GRREIKDTPY SVSVIDKTLI ENQQATTLPD LLKYMPSTQM EARGGGDVGR PQSRGMQGTP VFNNRLDGMN IVATTAQPIE MYERVEVVHG LAGAYFGPAS PGGLFNFTRK RPTQDPYNRI NTGFTGKGTW LAHGDFGGHA ADGMLGYRIN VLSEEGDGYV KGSDLDRSLI SGAFDINLTD QTTIELNASR YRFDKFGFPG SFSYDNSVTL PDAPDPTKVG YGQKFAGYGL EDTLVGGLVK HRFNEDWSLT AGMQHQRVSR WFVSVSNALL DDDGNYSNSI DGGVSGQFRV TSNIAVLNGT LFTGGVKHDV HLGTTGVNWE NYSPRSGNPS VQGYLGDASI DNPVQWDAPT GLVRNGPRYR SFSNRSQSLV LGDSITFNGQ WSAILSGSYT WFDVKNYDET GTVTQKYSER GLSPSVALSY KPAENITTYV AYVDTLQSGG TAPTTAANAG QVLAPERSKQ VEAGVKADLG GLDASVAVFR IERPFAFTGE DNVYRIQGDQ VNKGIELELR GQLLENLNIH GGVTLLDPKL RNTGNPLTSD TDVVGAPKVQ ANLFMEYFFK SLPELSASAN LHFTGKRAGN NINSFKVDSY ATLDLGLRYE RQMTKDTTAV FNLAINNVFD EHYWASIFPG SIDGATRGAN SAFLGAPREV RLSASFKF
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