Gene Pden_3003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3003 
Symbol 
ID4581569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp175755 
End bp176288 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content68% 
IMG OID639770329 
ProductMxaD protein, putative 
Protein accessionYP_916782 
Protein GI119385727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0105582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACC GCAGAACCCT GCTAGCCTCG GCGCTGACGG CGCTGGTCGC GACCCCGCTG 
CTCGCCCATG GCCCGACGCC GCAGCAACTG TCGCGCAGCG TCAAGGTGGC CGCCCCGCCC
GAGAAAGTCT GGGCCCTGCT TGCCGATCCG GCCTCGATCG CGGCCTGGCA TCCGGCCATC
GCCGAGGCCA GCATGGAGGG CGATGGCGCC GGCGCGAAGC GCAGCATCGC ATTCAAGTCG
GGCGGCATCC TGGTCGACGG CATCGACGAC ATCGGCGCCG AGACGATGAC GATCCGCTGG
CGGCTGTCCC GGGAAGACAT CGAGGTGTTT CCGGTCAGCT TCTATACCAA CAGCGTCACG
GTGACACCCG ACGGCGACGG TGCAAGCGTC GCATGGCAGG CCAGCTTCTT CCGCGCCGAC
ACGACCAACG AGCCCGAGGA GCGGTTCAGC GACGAGGCCG CCGTCGCGGC CATGGAGAAA
TATGTCGATG ACGCCCTGGC CGGGATCAAG GCCACGGCCG AAACCGGCAG CTGA
 
Protein sequence
MMNRRTLLAS ALTALVATPL LAHGPTPQQL SRSVKVAAPP EKVWALLADP ASIAAWHPAI 
AEASMEGDGA GAKRSIAFKS GGILVDGIDD IGAETMTIRW RLSREDIEVF PVSFYTNSVT
VTPDGDGASV AWQASFFRAD TTNEPEERFS DEAAVAAMEK YVDDALAGIK ATAETGS