Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2976 |
Symbol | |
ID | 4581542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 150708 |
End bp | 151268 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639770302 |
Product | transposase, IS4 family protein |
Protein accession | YP_916755 |
Protein GI | 119385700 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.119595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAGCGAG AAAGGCATTT TCGCCAGGAT GATGATCGGG CTGGCCGCCG ACCACGGCGA GGAAAAGACC GTGATGATCG ACGCGACCTA TCTGAAAGCG CACCGCACCG CGACCAGCAT GGCCGCGAAA AAGGGGGGCG TGGACGCCTC GTCGGCCGGA CCAAGGGCGG CATGAACACG AAGCTGCATG CCATCTGTGA CAGCCTGGGC CGACCGCTCG ACCTGTTCGT CACCGCAGGG CAGGTCAGCG ACTACATCGG GGCGCGGGCG TTGCTCAGCA GCCTCCCAAA GGTCGATTGG CTGCTCGGGG ATCGCGGCTA TGACGCCGAC TGGTTCCGGG AAGCCTTGCA GGACAAGGGG ATACGAGCCT GCATCCCCGG TCGAAAGCAG CGCAAGACAC CGGTCAAATA CGACAAGCGC CGATACAAGC GGCGCAACCG CATCGAGATC ATGTTTGGCA GGCTCAAGGA CTGGCGGCGC GTGGCAACCC GATACGACAG ATGCCCGAAG GTCTTCCTCT CGGCCATCGC GCTCGCGGCA ACCGTCATTT ATTGGTTATG A
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Protein sequence | MERERHFRQD DDRAGRRPRR GKDRDDRRDL SESAPHRDQH GREKGGRGRL VGRTKGGMNT KLHAICDSLG RPLDLFVTAG QVSDYIGARA LLSSLPKVDW LLGDRGYDAD WFREALQDKG IRACIPGRKQ RKTPVKYDKR RYKRRNRIEI MFGRLKDWRR VATRYDRCPK VFLSAIALAA TVIYWL
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