| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2965 |
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| Symbol | |
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| ID | 4581532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 135504 |
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| End bp | 138113 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639770292 |
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| Product | ribonuclease |
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| Protein accession | YP_916745 |
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| Protein GI | 119385690 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0116298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.140468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAGA AAATGCTGAT CGACGCCACG CATTCCGAGG AGACTCGGGT TGTCGTGGTC
GATGGAACCA AGGTCGAGGA ATTTGATTTC GAGACGGTCA ACAAGCGGCA GCTTGCTGGC
AACATCTATC TGGCCAAGGT AACGCGGGTC GAACCCTCGC TCCAGGCCGC TTTCGTGGAT
TACGGCGGCA ACCGCCATGG CTTCCTGGCC TTTGCCGAGA TCCATCCCGA TTACTACCAG
ATCCCCGCCG CCGACCGTAA GGCGCTGCTG GAAGAGGAGC GCCAGGCCGC CGCGGCCGAG
GCCGACGAAG GCGAGAAGCC CAAGCGCAAC CCGCGCCGCC GCAAGCCGGC CAAGGCCGCC
GCCGCCGAAA GCGGCGATGC CGTCCTGGTC TCGGACGAGA TCGCCGGGAT GACCGTGGTG
GACCCCTCGG AGGGCGAGGC CGTGCCGCTG GACGCCCCGC TTGCCGCTGA TACGGCCGAA
GCCGCGGCGC CGGCAGCGGC TGCGGACAGC GCCGAGGATG CCCCGGCCGA GGAAGCCGCC
GAGGACGACG GCATCGAATC CGTCGCCGAG GAGGACATGG CCGAGGAGAT CTCGGCCCCC
AAGAAGCCGC GCGCCCGCCG CTACAAGATC CAGGAGGTGA TCAAGGTCCG GCAGATCATG
CTGGTCCAGG TCGTCAAGGA GGAACGCGGC AACAAGGGCG CCGCGCTGAC CACCTATCTG
TCGCTGGCCG GCCGCTATTG CGTGCTGATG CCGAACACGG CGCGCGGCGG CGGGATTTCC
CGCAAGATCA CCAACGCCGC CGACCGCAAG AAGCTGAAGG AGATCGCCAG CGAACTGGAG
GTGCCGGAAG GCGCCGGGCT GATCATCCGC ACCGCCGGCA GCCAGCGCAC CCGCACCGAG
ATCCGCCGCG ACTACGAATA CCTGATGCGG CTGTGGGAGC AGATCCGCGA TCTGACCTTC
AAGTCCATCG CCCCGGCGCC GATCTATGAG GAAGGCGACC TGATCAAGCG CACGATCCGC
GATCTCTACA GCAAGGAGAT CGACGAGGTC CTGGTCGAGG GCGAGCGCGG CTATCGCACG
GCCAAGGACT TCATGAAGAT GATCATGCCG TCCCACGCCA AGAACGTGAA GCACTACACC
GACGCGATGC CGCTTTACGC GCGCTATCAG GTGGAAAGCT ATCTTGGCGG CATGTTCAAC
CCGGTCGTGC AGCTGAAATC CGGCGGCTAT ATCGTCATCG GCGTGACCGA GGCGCTGGTC
GCCATCGACG TGAACTCGGG CCGGGCCACC AAGGAAGGCT CGATCGAGGA CACCGCGCTC
AAGACCAACC TGGAAGCGGC CGAGGAGATC GCGCGCCAGC TGCGGCTGCG CGACCTGGCC
GGGCTGATCG TCATCGACTT CATCGACATG GAGGAGCGCA AGAACAACGC CGCCGTCGAG
AAGCGCTTCA AGGACAAGCT CAAGACCGAC CGGGCGCGGA TCCAGGTCGG CCGCATCTCG
GGCTTCGGCC TGATGGAGAT GTCGCGCCAG CGCCTGCGGC CGGGCATGCT GGAATCGACC
ACGCAGCCCT GCCCGCATTG CCATGGCACC GGGCTGATCC GCAGCGACGA CAGCCTGGCG
CTGACCATCC TGCGCGCCAT CGAGGAAGAG GGCACCCGCA AGCGTTCGCG CGAGGTTCTG
GTCAAGGCGC CGGTCGCGGT GGCCAACTTC CTGATGAACG CCAAGCGCGA GCACATCGCC
AATATCGAGG CACGCTATGG GCTTTCGGTC CGGGTCGAGG CCGATCCGGC GCTGATCTCG
CCCGATTACG CCATCGAGAA GTTCAAGACC GCGACCCGCA ACGTGCCCGA GGTGGTTTCG
CCCGTGGTTT CGGTCGATGC CCGCCTGATG GCGCAGATCG ACGACGAGGA GCCGGCCGAG
GAAGAGGTCG AAGAGATCGC CGACGAGCCG GTCGAGGAGG ATCGCGCCGA GAGCGGGGAT
GGCGAGAATG GCAGCAAGCG CCGCCGTCGC CGTCGTCGTC GCCGGGGCGG CAAGAATGGC
GAGGACGAAG CGCCTCATGC CGGGGACGAT GCCGATGAGG TGGCCTTGGA AACCGAGGAG
GCCGACCAGC CTGCCGAGGT CGAGGTGATC GTGGAGGCGG TCGAGAGCGC GCCCGAGCCG
GTGGCGGAGG AGGCCGAAAA GCCGCGCCGC CGCACCCGCA CGCGCCGCCG CAAGGCGGAT
GAGCCGGCCG AAGCCGTGGC TGAGGCGGGG CCTGCCGAGG GGGCCCAGCC CGGAGAACCG
GCCGAGACCG CCGCAGACGC GCCACAGCCT GTTGCCGAGG CTTCGGAGGT CGAGCAACCT
GCCGAGGCCG TCGAACCCGC CGTCGAGCCG GAACCGGAGG CCGCCGCCGC GGATGTGCCG
CCTGCCGACG AGGCTGTGGA GACCGTGCCG GCCGGCGAAA CCGCCGGATC CGAGGCCGTT
GCGCCCCAGT CCGAGGCCGA CACGGCCGCG GAGCCCGCGC CTGCGCCGGA GCCCGAGGCC
TTGCCCGCCG CAGTCCGGGT GCCGGAGCCC GCGGCGGCGA ACGAGGAACC CGCGCGTCCC
AAGCGCCGCG GCTGGTGGTC CCTGGGCTGA
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| Protein sequence | MSKKMLIDAT HSEETRVVVV DGTKVEEFDF ETVNKRQLAG NIYLAKVTRV EPSLQAAFVD
YGGNRHGFLA FAEIHPDYYQ IPAADRKALL EEERQAAAAE ADEGEKPKRN PRRRKPAKAA
AAESGDAVLV SDEIAGMTVV DPSEGEAVPL DAPLAADTAE AAAPAAAADS AEDAPAEEAA
EDDGIESVAE EDMAEEISAP KKPRARRYKI QEVIKVRQIM LVQVVKEERG NKGAALTTYL
SLAGRYCVLM PNTARGGGIS RKITNAADRK KLKEIASELE VPEGAGLIIR TAGSQRTRTE
IRRDYEYLMR LWEQIRDLTF KSIAPAPIYE EGDLIKRTIR DLYSKEIDEV LVEGERGYRT
AKDFMKMIMP SHAKNVKHYT DAMPLYARYQ VESYLGGMFN PVVQLKSGGY IVIGVTEALV
AIDVNSGRAT KEGSIEDTAL KTNLEAAEEI ARQLRLRDLA GLIVIDFIDM EERKNNAAVE
KRFKDKLKTD RARIQVGRIS GFGLMEMSRQ RLRPGMLEST TQPCPHCHGT GLIRSDDSLA
LTILRAIEEE GTRKRSREVL VKAPVAVANF LMNAKREHIA NIEARYGLSV RVEADPALIS
PDYAIEKFKT ATRNVPEVVS PVVSVDARLM AQIDDEEPAE EEVEEIADEP VEEDRAESGD
GENGSKRRRR RRRRRGGKNG EDEAPHAGDD ADEVALETEE ADQPAEVEVI VEAVESAPEP
VAEEAEKPRR RTRTRRRKAD EPAEAVAEAG PAEGAQPGEP AETAADAPQP VAEASEVEQP
AEAVEPAVEP EPEAAAADVP PADEAVETVP AGETAGSEAV APQSEADTAA EPAPAPEPEA
LPAAVRVPEP AAANEEPARP KRRGWWSLG
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