Gene Pden_2904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2904 
Symbol 
ID4581471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp66046 
End bp67308 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content68% 
IMG OID639770231 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_916684 
Protein GI119385629 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.264185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.421653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGAG TTGTCGTCAC CGGACTGGGG ATGGTCACGC CGCTGGCCTC GGGGGTCGAG 
GAGACCTGGT CGAGGCTTCT GGCCGGAGAA TCCGGCGCCG GACCGATCAC CCGGTTCGAC
ACCAAGGACG TGGCGACGAA ATATGCCTGC GAGATCCCCT TGGGCGACGG CTCGGAAGGG
ACGTTCAACC CCGACGACTG GATGGAGCCC AAGGACCGGC GCAAGGTCGA CGACTTCATC
CTTTACGGCA TGGCCGCCGC CGAGCAGGCG GTGAAGGATT CCGGCTGGGA GCCGGCGAAC
GAGGACGAGC GCGAGCGCAC CGGGGTCATG ATCGGCTCGG GCATCGGCGG GCTGCGCTCG
ATCGCCGAGA CGGCGGTGCT GATCAAGGAA CGCGGGCCTA AGCGGGTCAG CCCGTTCTTC
ATTCCGGGGG CGCTGATCAA CCTGGTCTCG GGCCAGGTCT CGATCCGCTT CGGCTTCAAG
GGGCCGAACC ATGCGGTGGT CACGGCCTGC TCGACCGGGG CGCATGCCAT CGGCGACGCG
GCGCGGCTGA TCGCGCTGGG CGACGCGGAT GTCATGGTCG CCGGCGGCAC CGAAAGCCCG
ATCTGCGAGA TCGGCATCGC CGGCTTCAAC GCCTGCAAGG CGCTGTCGAC CAAGCGCGAG
GACGACCCCA AGGCGGCGAG CCGCCCCTGG GACGAGGATC GCGACGGCTT CGTCATGGGC
GAGGGCGCGG GCGTCGTGGT GCTGGAGGAA TACGAGCACG CCAAGGCGCG CGGCGCCAGG
ATCTATGCCG AGATCCTGGG CTATGGCCTG TCGGGCGACG CCTATCACAT CACCGCGCCC
AGCGAGGACG GCGACGGCGG TTTCCGCAGC ATGACCAATG CGCTGAAGCG CGCCAACCTG
TCGCCGGGCG ACCTGGACTA TATCAACGCG CACGGCACCT CGACCATGGC CGACGTGATC
GAGCTGGGCG CGGTCGAGCG GCTGCTGGGC GATGCGGCGG GCAATGTGGT GATGTCCTCG
ACCAAATCGA GCATCGGGCA TCTGCTGGGC GCGGCGGGCG CGGTCGAGGC GATCTTCTGC
ATCCTTGCCA TCCGCGACCA GATCTGCCCG CCGACCATCA ACCTGGACAA CCAGGCGCGC
GAGACGGCCA TCGACCTGGC CGCCAATGCC GCGGTGCGGC GCAAGGTGGA TCATGTGCTG
TCCAACAGCT TCGGCTTTGG CGGCACCAAT GCCAGCCTGG TGATGGGACG GGTCAAGGAA
TGA
 
Protein sequence
MRRVVVTGLG MVTPLASGVE ETWSRLLAGE SGAGPITRFD TKDVATKYAC EIPLGDGSEG 
TFNPDDWMEP KDRRKVDDFI LYGMAAAEQA VKDSGWEPAN EDERERTGVM IGSGIGGLRS
IAETAVLIKE RGPKRVSPFF IPGALINLVS GQVSIRFGFK GPNHAVVTAC STGAHAIGDA
ARLIALGDAD VMVAGGTESP ICEIGIAGFN ACKALSTKRE DDPKAASRPW DEDRDGFVMG
EGAGVVVLEE YEHAKARGAR IYAEILGYGL SGDAYHITAP SEDGDGGFRS MTNALKRANL
SPGDLDYINA HGTSTMADVI ELGAVERLLG DAAGNVVMSS TKSSIGHLLG AAGAVEAIFC
ILAIRDQICP PTINLDNQAR ETAIDLAANA AVRRKVDHVL SNSFGFGGTN ASLVMGRVKE