Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2901 |
Symbol | |
ID | 4581468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 61607 |
End bp | 62809 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639770228 |
Product | HK97 family phage portal protein |
Protein accession | YP_916681 |
Protein GI | 119385626 |
COG category | [S] Function unknown |
COG ID | [COG4695] Phage-related protein |
TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.149993 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.456883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTTC CCTGGTTCGG GCGCCGGGCC GCGCCCGCGA GGCCGCCTGT CGCCGAGGTC GAGCAGAAGG CCAGCGCCGC CGGCAAGCTG GTGGCTCTGG CGGCGGGTTC GGGGCGCGTG GTCTGGTCGC CGCGCGATAC GGTCAGCCTG ACGCGCCTGG GTTTCGTCGG CAATCCGGTC GGGTTCCGCG CCGTGCGGCT GATCGCCGAG GCCGCCGCCG CCGTGCCGCT GATCTGCCAG GATCGCGAGC GGCGCTATGA CGTGCATCCG GTGCTGGACC TGCTGCGCCG GCCCAATCCG GGGCAGGGCC GGGCCGAGCT GTTCGAGGCG CTGTTCGGCC AGATCCTGCT GAGCGGCGAC GGCTATCTGG AGGCGGTGGG CGCGGATGCC CGCGGGCTGC CGGCTGAGCT GCATGTCCTG CGCGCCGACC GGATGGCGGT GGTGCCGGGG CCGGACGGCT GGCCCGTCGC CTATGAATAC GGCGTGGGCG GGCGCAAGGT CCGCTTCGAC ATGGCCGGCA GTCCCGATCC GATCTGCCAT ATCCGCAGTT TCCATCCGCT GGACGACCAT CACGGGCTGT CGCCGATGCA GGCGGCGGCG GTGGCGGTGG ACGTGCATAA CAGCGCGTCG AGCTGGTCCA AGGCGCTTTT GGACAATGCG GCGCGGCCCA GCGGCGCCAT CGTCTACAGG GGCGCCGACG GGCAGGGCGG CCTGTCGCCG GACCAATACG ACCGGCTGGT GACCGAGATG GAGATGCATC ACCAGGGCGC CCGGAATGCC GGGCGGCCGA TGCTGCTGGA AGGCGGGCTA GACTGGAAGC CGATGGGGTT CTCGCCCTCG GACATGGAGT TTCACCAGAC CAAGCTGGCG GCGGCGCGCG AGATCGCGCA GGCCTTCGGC GTGCCGCCGA TGCTGATCGG CATTCCGGGC GAGGCGACCT ATGCCAATTA TGCCGAGGCG CATCGGGCCT TTTACCGGCT GACGGTGCTG CCGCTGGTGT CGCGCGTGGC CGGGGCCCTG GCCTGGTGGC TTTCCGAGCA TCTGGGGGCC GAGATCGACC TGCGCGCCGA TCCCGACCAG GTGCCGGCCC TGGCCGAGGA GCGCGACCAG CAATGGAAGC GCGTGGGCGA GGCAAGCTTT CTGACCGATG CCGAAAAGCG GGCGGTGCTG GGGCTGCCGC CCTTGCCGGA GGGGGAGGGG TGA
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Protein sequence | MAFPWFGRRA APARPPVAEV EQKASAAGKL VALAAGSGRV VWSPRDTVSL TRLGFVGNPV GFRAVRLIAE AAAAVPLICQ DRERRYDVHP VLDLLRRPNP GQGRAELFEA LFGQILLSGD GYLEAVGADA RGLPAELHVL RADRMAVVPG PDGWPVAYEY GVGGRKVRFD MAGSPDPICH IRSFHPLDDH HGLSPMQAAA VAVDVHNSAS SWSKALLDNA ARPSGAIVYR GADGQGGLSP DQYDRLVTEM EMHHQGARNA GRPMLLEGGL DWKPMGFSPS DMEFHQTKLA AAREIAQAFG VPPMLIGIPG EATYANYAEA HRAFYRLTVL PLVSRVAGAL AWWLSEHLGA EIDLRADPDQ VPALAEERDQ QWKRVGEASF LTDAEKRAVL GLPPLPEGEG
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