| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2828 |
|---|
| Symbol | |
|---|
| ID | 4581159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 2845199 |
|---|
| End bp | 2846197 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639770155 |
|---|
| Product | formate dehydrogenase, beta subunit |
|---|
| Protein accession | YP_916608 |
|---|
| Protein GI | 119385552 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | [TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.73714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGG ACCCGAACCT CGACAGCCCG CGCACGGCGG TCTCGAACCC GCCGGTGCAG
CCGATGCAGG CCAACCTGGG GCCGGGCGAT GTCGTCCGTT CCTCGGCTAT GCCCGACCTG
CCGCCGCCGA CGCGCGAGTT GACGCCGGTG GCCAAGCTGA TCGACGTGTC GAAATGCATC
GGCTGCAAGG CGTGCCAATC GGCCTGCGCC GAATGGAACG ACACCTATCC CGAGATCGAG
CAGAACGTCG GCCTTTACGA AAACCCGCAC GACCTGACGC CCGACATGTT CACCCTGATG
CGGTTTTCCG AATACGAGAA CCCGCAGACC GGCGATTTCG AATGGTTGAT CCGCAAGGAC
GGCTGCATGC ATTGCGCCGA TCCGGGCTGT CTCAAGGCTT GCCCGGCCCC CGGCGCCATC
GTGCAATATT CGAACGGCAT CGTGGATTTC ATCCACGAGA ACTGCATCGG CTGCGGCTAT
TGCGTGACGG GCTGTCCGTT CAACATCCCG CGCATCAGCC AGAAAACCCA TGTCAGCTAC
AAATGCACGC TGTGTTCGGA CCGGGTGGCG GTAGGCCAGG GTCCGGCCTG CGCCAAGGCC
TGCCCTACCC AGGCCATCGT CTTCGGCACC AAGGAGGACA TGCTGGCCCA TGCCGAAGCG
CGGGTCGAGG ACCTGAAGTC GCGCGGCTAC GACAATGCCG GCATCTATGA TCCGCAGGGG
GTGGGCGGCA CGCATGTCTT CTATGTGCTG CATCATGCGG ACCAGCCCTC GCTTTACTCC
AACCTGCCCG AGGAGCCGCG CATCTCGCCG GTGGTCGAGG GCTGGAAGGG CGTGACCAAG
ACGCTGGGCC TGGCCGCCAT CGGTGCGGCG GCCATCGGCT CGGTCCTGCA CGGGCTGATG
ACACGCGCCA ACAAGGTCTC GGCCGAGGAT GAAACCCATG CCGAGGAACT GGTCGAGGCG
CGCGAACCCC CGGTCCCGCC GGGAAGGGAG GTGCTGTGA
|
|---|
| Protein sequence | MTTDPNLDSP RTAVSNPPVQ PMQANLGPGD VVRSSAMPDL PPPTRELTPV AKLIDVSKCI
GCKACQSACA EWNDTYPEIE QNVGLYENPH DLTPDMFTLM RFSEYENPQT GDFEWLIRKD
GCMHCADPGC LKACPAPGAI VQYSNGIVDF IHENCIGCGY CVTGCPFNIP RISQKTHVSY
KCTLCSDRVA VGQGPACAKA CPTQAIVFGT KEDMLAHAEA RVEDLKSRGY DNAGIYDPQG
VGGTHVFYVL HHADQPSLYS NLPEEPRISP VVEGWKGVTK TLGLAAIGAA AIGSVLHGLM
TRANKVSAED ETHAEELVEA REPPVPPGRE VL
|
|---|
| |