Gene Pden_2816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2816 
Symbol 
ID4581395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2833781 
End bp2834662 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content64% 
IMG OID639770142 
Productputative ribonuclease BN 
Protein accessionYP_916596 
Protein GI119385540 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.664042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCAGGG ATTGGTGGCA GTTCGTCCTG GCGATCTTTG AACGGATGGA CAAGATCCAC 
ATGAGCCTGA TCGCCGCCGG GGTGGCATTC TATGCCATGT TCGCGGTGTT TCCCGGGCTT
GCCGCGCTGT TCGCGCTGTG GGGGTTGTGG AACGACCCGC AGGTGATCGA GCAATACGTC
CATGCCACGG ACGGCTTCAT CCCGCAAAGC GCTGCCGACA TCATCTATGG CCAGATCAGC
GCCCTGGTGG CGGCCGGACG CACGCAACTG GGCTGGACCA CGGCGATTTC CTTCCTTATC
GCCACCGTCT CGGCCCGTGC CGGGGTGGAC GGGCTGATCC GGGGGTTGAA CGCGGCCTAT
GGCGTGCGCT CGCATTCCAC GGTCATGGGA TTCCTGCTGG CCTATGTGCT GACGCTGGTC
ATCGTGCTGG TGATCGCGCT GGGGCTGGTC ACCATCGTCG TGGTGCCCAT CGCCTTCAAC
TTCCTGCCCG ACGTGCCCTT GCGCAACTGG CTGATCGGCG CCCTGCCGTG GATGGCGATC
TTTTTCATCG TGCTGGTGGT GATCGGCATC CTCTACCGCT ATGGCCCCAA CGTGAAGACG
CCGCGCACCG CGATCTTCAC CTGGGGCTCG GTCTTCGCGG CGCTGGCCTG GGCGGCGGCG
TCCTATGGCT TCTCGGCCTA TCTGGCCAGC TTCAACAGCT ACAACCGCAT CTATGGCTCG
ATCGGCGCGG TGATCGCGCT CTTGATGTGG TTCTATCTGG GCGGCTTCAC GGTCATGCTG
GGGGCGCTGA TCAACGTGGA ACTGTCCCGC CGCCGCCGCT TCATCGCCGC AAAGAAGATG
CGGCAGGCAG CGCGAAAGCA GGACGCGGGC AAGGCATCGT GA
 
Protein sequence
MIRDWWQFVL AIFERMDKIH MSLIAAGVAF YAMFAVFPGL AALFALWGLW NDPQVIEQYV 
HATDGFIPQS AADIIYGQIS ALVAAGRTQL GWTTAISFLI ATVSARAGVD GLIRGLNAAY
GVRSHSTVMG FLLAYVLTLV IVLVIALGLV TIVVVPIAFN FLPDVPLRNW LIGALPWMAI
FFIVLVVIGI LYRYGPNVKT PRTAIFTWGS VFAALAWAAA SYGFSAYLAS FNSYNRIYGS
IGAVIALLMW FYLGGFTVML GALINVELSR RRRFIAAKKM RQAARKQDAG KAS