Gene Pden_2786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2786 
Symbol 
ID4581365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2805825 
End bp2806481 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content68% 
IMG OID639770112 
Productimport inner membrane translocase, subunit Tim44 
Protein accessionYP_916566 
Protein GI119385510 
COG category[S] Function unknown 
COG ID[COG4395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.242011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACC CCCTGCTGCA ACTGCTCGTC CTCGCGGCGA TTGCCGTATT CCTGATCCTG 
CGCCTGCGCG GGGTTCTTGG CACGCGTGAC GGGTTCGAAT CGCCGCGCAT ACCCGAGGAG
CCGGTGCAGC GCCGCCGCTT CGACGTGATC GACGGGACCG CCGAGGCGGG CGACAGCGAC
ATCACCGACC ATGCCGAACC CGGCAGCCCC GCAGCCAAGG CCCTGGCCGA GATGAAGCGG
ATCGAGCCCG ATTTCGCCGT GGGTCCGTTC CTGTCGGGCG CGAAATCCGC CTATGAGATG
ATCCTGATGG CTTTCGAGCG CGGCGATCTG TCCGAGGTGC GCGGCTTTCT GGCGCCGCCG
GTGGCCGAGG CTTTCGAGTC GGTGATCGAG GATCGCAAGG CCCGCAACCT GACCACCGAG
GCGCAGTTCC TGGGCACCCG CGAAACCGCG CTGGCCGGGG CCGAGTTCAC CCCCGCCACC
GGCATGGCCG AGCTTTCGGT GCGCTTCGTC GGCGAGATGA TCGTCGCCAC CCGCGACGCC
GACGGCAATG TGATCGAGGG CGATCCCAAG GCCGCCCGCA AGCAGCGCGA CACCTGGACC
TTTGCCCGCC GCATGGGTCA GGACGACCCG AACTGGCAAC TGGTCGCCAC GGCCTGA
 
Protein sequence
MSNPLLQLLV LAAIAVFLIL RLRGVLGTRD GFESPRIPEE PVQRRRFDVI DGTAEAGDSD 
ITDHAEPGSP AAKALAEMKR IEPDFAVGPF LSGAKSAYEM ILMAFERGDL SEVRGFLAPP
VAEAFESVIE DRKARNLTTE AQFLGTRETA LAGAEFTPAT GMAELSVRFV GEMIVATRDA
DGNVIEGDPK AARKQRDTWT FARRMGQDDP NWQLVATA