Gene Pden_2785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2785 
Symbol 
ID4581364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2805135 
End bp2805713 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content69% 
IMG OID639770111 
ProductFxsA cytoplasmic membrane protein 
Protein accessionYP_916565 
Protein GI119385509 
COG category[R] General function prediction only 
COG ID[COG3030] Protein affecting phage T7 exclusion by the F plasmid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.37721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCTGC TGTTGCCTTT CGTGATCCTG CCGATCGTCG AGATCGCGCT GTTCATCCAG 
GTGGGGGGCG TGATCGGCGT CCTGCCCACG ATTGCGCTGG TCCTGGCCTC GGCCGTGGCC
GGTGCGGCGG TGATGCGGCA TCAGGGTGCG CGCGCGGCGC TGGACGTGCA GCGCGCCATG
CAGGAATTCC GCGATCCGGG CCGGCCGATG GCGCATGGCG CGCTGGTCAT GATCGCAGGG
CTGCTGATGG TGGTGCCGGG GCTGTTCACC AGCGCATTGG GGCTTTTGCT GCTGATTCCG
GCAGTGCGCA GCCTGATCCT GCGGCAGATG GCGTCGCGGG TGCAGGTTTC GGGCAGCGGC
TTCAGCTATC GGCAGGGCTA TGGTGCCGAA GGCGATTTCG GTGCCGATCC AGCGGGCTTT
CGCCGCGGTC CCGGCTGGCG CGACGAAGGG GTGATCGACG GCGAATACTC GGTGCAGGAC
GACCCGCCCG GCCCGGTGCG CGAAGGGCTG ACCGACCAGG GCGACGGCAC GGGCGAGCAG
TCTCCGCGGC GCGGCAATTC GGGCTGGACC CGGCATTGA
 
Protein sequence
MWLLLPFVIL PIVEIALFIQ VGGVIGVLPT IALVLASAVA GAAVMRHQGA RAALDVQRAM 
QEFRDPGRPM AHGALVMIAG LLMVVPGLFT SALGLLLLIP AVRSLILRQM ASRVQVSGSG
FSYRQGYGAE GDFGADPAGF RRGPGWRDEG VIDGEYSVQD DPPGPVREGL TDQGDGTGEQ
SPRRGNSGWT RH