| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2721 |
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| Symbol | |
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| ID | 4580356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2738891 |
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| End bp | 2740060 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639770047 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_916501 |
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| Protein GI | 119385445 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.938763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.792489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCTG GGCAGGGGAT GATAAGATGG GCGGCGCTGG CGATCCTGCT GGCGGGCCAG
GCTTTCGCGC AACAGGGGCC GGGCGGGCGC GGGCCGCAAG GTCCGACCGA AGTCGGCGTG
ATGGCCACCG CCGAGGAGGA CGTGCCCTAT ACCGTCACCC TGCCCGGCCG CGCCATCGCC
TATCAGCAGA CCGGCATCCG GCCGCAGGTC GGGGGTGAAG TTCTTGAAAT CGCCTATGAT
CCGGGCAGGC CGGTCAAGGC CGGCGACGTG CTGTTCCGGC TGGACCCCGA GACCCTGGCC
GCAGCGCTGG CCGCAGCCGA GGCCGCCGTG GCGGGCGCCG AGGCCAGCCT GACCCAGGCG
CAGAACACCG TCACCCGCTA TCGCCGGCTG GAGGGCTCGG GCGTCTCGGC CGTGGACCGC
GCCAATGCCG AGGTGGCGCT GAAACAGGCC GAGGCCGACC TGAAATCCGC CGAAGCCGCG
CGGGATGCGG CGCGGCTGGC CTTGCAGCGC ACCGAGATCA GGAGCCCGCT GGACGGCGTG
GCGGATGTGG CCGCGGTCTC GGTCGGGGAT CTGGTGACGG CGAGCCAGTC CGAATCGCTG
ACCACCATCA CCCAGCTCGA CCCGATCTAT GTCGACGTGT CGGAATCCAG CGCCCGCATG
CTGCGCAACC GGGCGCGCAT CAGTGCCGGC CAGTTGACCG TCAACGGCGG GGTGGGGACG
CAACTGATCC TGGAGACCGG CGAGGAATAC CAGGGCGCGG GGCGGATCGT CAGCCCCGGC
ATCACGGTTT CGCCCACCAC CGGGACGGTG CCGATTCGGC TGCAATTCGA CAATCCCGAC
CAGATGATCC TGCCCGGCCA GTTCCTGCGC GTGAAGCTGA CGCTGGGCAC GACCCGCGCC
GTCCTGGTGC CGCAGCGTGC GACCAGCCGC GCCTCGGACG GCACGCTGAC CGCCTTTGTC
GCCCGCGACG GCAAGGCCCA GCAGGTCACG CTGAGCGAAC AGGGCAGCCA TCGCAACAGC
TGGATCGTCA CCCAGGGCAT CAATCCGGGC GAGCAGTTGA TCGTGGACGG GCTGGACAAC
CTGCGCGCCG GCACCGAGAT CGCCACCGTC CCCGTCACCA TCGACGCCCA GGGCGTCGTG
CGCGAGGTCG ATGAGCGCGG GGAAGGCTAG
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| Protein sequence | MASGQGMIRW AALAILLAGQ AFAQQGPGGR GPQGPTEVGV MATAEEDVPY TVTLPGRAIA
YQQTGIRPQV GGEVLEIAYD PGRPVKAGDV LFRLDPETLA AALAAAEAAV AGAEASLTQA
QNTVTRYRRL EGSGVSAVDR ANAEVALKQA EADLKSAEAA RDAARLALQR TEIRSPLDGV
ADVAAVSVGD LVTASQSESL TTITQLDPIY VDVSESSARM LRNRARISAG QLTVNGGVGT
QLILETGEEY QGAGRIVSPG ITVSPTTGTV PIRLQFDNPD QMILPGQFLR VKLTLGTTRA
VLVPQRATSR ASDGTLTAFV ARDGKAQQVT LSEQGSHRNS WIVTQGINPG EQLIVDGLDN
LRAGTEIATV PVTIDAQGVV REVDERGEG
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