Gene Pden_2692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2692 
Symbol 
ID4581237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2708037 
End bp2710103 
Gene Length2067 bp 
Protein Length688 aa 
Translation table11 
GC content68% 
IMG OID639770021 
Producthypothetical protein 
Protein accessionYP_916475 
Protein GI119385419 
COG category[R] General function prediction only 
COG ID[COG3008] Paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA GGCCCTCGCC CGAGCGCAGC GACGCCCCCC TGAAACCCGC AGAACCCGCC 
CGCAAGCCCG CGGCCCGCGC CGTGCGGGCC GGGCTGCCGC TGATCTGGCT GGTGCCCATC
GTGGCGCTGA TCGTGACGTT GGGCGTGGGC TGGAACGCCA TCGCCAGCCG TGGCACGCTG
ATCTCGGTCG CCTTCAAGGA CGCGACCGGC ATCACGCCCG GAGAGACGGC GCTGAAATTC
CGCGAGATCA CCGTGGGCAA GGTGGAATCG GTCCGCTTCA CCGAGGATCT GCAACAGGTC
GAGGTGAACA TGCGCGTGGA CAAGGACCTT GCGCCCTATA TCGACAAGGA TGCGCAGTTC
TGGATCGTGC GGCCGCAGGT TTCGGCCCAG GGCATCTCGC GGCTGGATAC CGTTCTGACC
GGCTCTTTCG TCGAGGGTTA CTGGGACAAC CAGGTGGACG GTCCGCAGAC CAGGTTCCAG
GGCCTCGACA AGCCGCCGCT GACGAGTTTC GGCGAGAAGG GCACCTGGAT CGTGCTGGCG
GCCGAACGCT CGCGCGGCAT GACCGAGGGC GCGCCGGTGC TGTTCCGTGG CCTGCCGGTG
GGGCGGATGC AGAACCTGCG GCTTTCCGAA ACCGACGAGG GCGTGCTGAC CGACGTCTTC
ATCGCCGCGC CCTATGACGA GTTGCTGACC ACGAACACGG TGTTCTGGGA CACTTCGGGC
TTTTCGGTCT CGCTGGGCGC GCAGGGGGTT TCGCTGAACG TGAACTCGCT GGCCTCGGTG
CTTCAGGGCG GTGCGGAATT CGCCACGCTG ACCTCGGGCG GGGCGCCGGT CGAGAACGGG
CACGTCTTTT CCCTGCAACC CGACCGCAGC GCGGCCGAGG CGAACCTGTT TGCCGACGAA
AGCAGGGCGC TGCGCTTGAC CATGCTGATC GACGAGTCGG TGAAGGGGCT GGAGACCGGC
GCCGACGTGC AGTTCATGGG CCTGACCGTC GGGCGCGTCA CCAGGCTGGC CGCGCGTATC
GTCCAGGATG CGGACGATCA GGACCGGGTC GAGCAGGAAG TGACGCTGGC CCTTACGCCC
GAGCGGTTGG GCCTGTCCGG CGACGTGACG CCGGAGCAGG CGCTGGACTT CATGGCCGGC
CAGGTCCGGG GCGGCCTGCG CGCCCGCCTG GCCAGCGCCG GCTTCTTCGG CACCTCGCTT
CAGGTCGAGT TGGTCGAATT GCCCGATGCC GAACCGGCCG AGCTGGACCG CGAGGGCAGG
CCCCATCCGA TCATCCCCTC GGTTCCCGGC GACATTTCCG ATTTCAGCGA GACCGCGCAG
GGCTTCCTGA CCCGCGTCGG CAACCTGCCC ATCGAGGAAG CGCTGAAATC CGTCACCGAC
ATGATGAACA GCGTCACCGC CATCGCCAGC AGCGAGGACA CCCGCGCCAT CCCCGGCGCC
CTGCGCGGCA CGCTGGAGGA TGCGCAGGCC GCTGCCGGCG AGATCCGCCA AGTCACCACC
GAACTGCGCG AATCCGGTGC CGTGGGGCAG TTGCGCCGCA TGGTGGACGA GGCCGCCGCC
GCAGCCGAGG CGGTCAAGCT TGCCGCCGCC GACGTGCCGG CGATGGTCGA CCAGATCGAT
GCCGCCGCGG TCAAGATCGA GGCGGTGGAT TACGCCGCCA TCGGCACCGA GGCCGAGGGC
ATCCTCAGGG ATGTGCGTGC GCTTCTGGGC ACGGAGGATG CCGAGCAACT GCCCAGGAAC
CTGTCCGAGA CGCTGAAATC CGCCTCCGGC CTGCTCAACG ACCTGCGCGA CGGCAATGCG
GCGGGCAGCC TCAACAACGC GCTCGCCTCG GCCAGCACCG CGGCGCAGGA TGTCTCGGAT
GCGGCGAAGC GCCTGCCGCA GCTTTCCGCG CGGCTCGAGG CGCTGGCGGC ACGGGCCGAT
GCGGTGATCG CCGCCTATGG CGACCGCTCC AGCTTCAACA ACGAGACCAT CAACCTGATG
CGCGAGATGC GCCGCGCCGC CAATGCCTTC GGCAGCCTTG CGCGGACCAT CGAACGCAAT
CCGCAAGCCT TCATCCTGGG ACGATAA
 
Protein sequence
MTDRPSPERS DAPLKPAEPA RKPAARAVRA GLPLIWLVPI VALIVTLGVG WNAIASRGTL 
ISVAFKDATG ITPGETALKF REITVGKVES VRFTEDLQQV EVNMRVDKDL APYIDKDAQF
WIVRPQVSAQ GISRLDTVLT GSFVEGYWDN QVDGPQTRFQ GLDKPPLTSF GEKGTWIVLA
AERSRGMTEG APVLFRGLPV GRMQNLRLSE TDEGVLTDVF IAAPYDELLT TNTVFWDTSG
FSVSLGAQGV SLNVNSLASV LQGGAEFATL TSGGAPVENG HVFSLQPDRS AAEANLFADE
SRALRLTMLI DESVKGLETG ADVQFMGLTV GRVTRLAARI VQDADDQDRV EQEVTLALTP
ERLGLSGDVT PEQALDFMAG QVRGGLRARL ASAGFFGTSL QVELVELPDA EPAELDREGR
PHPIIPSVPG DISDFSETAQ GFLTRVGNLP IEEALKSVTD MMNSVTAIAS SEDTRAIPGA
LRGTLEDAQA AAGEIRQVTT ELRESGAVGQ LRRMVDEAAA AAEAVKLAAA DVPAMVDQID
AAAVKIEAVD YAAIGTEAEG ILRDVRALLG TEDAEQLPRN LSETLKSASG LLNDLRDGNA
AGSLNNALAS ASTAAQDVSD AAKRLPQLSA RLEALAARAD AVIAAYGDRS SFNNETINLM
REMRRAANAF GSLARTIERN PQAFILGR