Gene Pden_2682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2682 
Symbol 
ID4581227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2699299 
End bp2700690 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content64% 
IMG OID639770011 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_916465 
Protein GI119385409 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT CCATCATCCG AGACATCGCC CTGGCCGATT ACGGCCGCAA GGAACTGGAC 
ATCGCCGAAA CCGAGATGCC CGGCCTGATG GCGCTGCGCG CGGAATACGG CGAGGCGAAG
CCGCTGAAGG GCGCCCGCAT CGCCGGCAGC CTGCACATGA CGGTGCAGAC CGCCGTGCTG
ATCGAGACGC TGGTGGCGCT GGGGGCCGAG GTCCGCTGGG CGTCCTGCAA CATCTTCTCG
ACCCAGGACC ATGCGGCGGC GGCCATTGCG AAAGCCGGCA TCCCGGTCTT TGCCGTCAAG
GGCGAGACGC TGCCGGAATA CTGGTCCTAT ACCGACCAGA TCTTCCAGTT CGCGGAAGGT
CCGGCGAACA TGATCCTGGA CGATGGCGGC GACGCGACCA TGTATGTGCT GCTGGGCGCG
CGCGTCGAGG CCGGCGAAAC CGGGCTGATC GACGTGCCCA CCAGCGAGGA GGAAGAGGCG
CTGTTCGCCC AGATCCGCAA GCGGCTGGAA GCCTCGCCCG GCTGGTTCAC CAGGCAGCGC
GATGCGATCC GGGGCGTCAG CGAGGAAACC ACGACCGGCG TGCATCGGCT TTACGACCTG
CACAAGAAGG GGCTCTTGCC CTTCCCGGCG ATCAACGTGA ACGACAGCGT CACCAAGTCG
AAATTCGACA ACAAGTACGG CTGCAAGGAA TCGCTGGTCG ACGGCATCCG CCGCGCCACC
GACGTGATGA TGGCCGGCAA GGTCGCGGTG GTCTGCGGCT ATGGCGACGT GGGCAAGGGC
TCGGCCGCGT CGCTGCGCGG CGCCGGCGCA CGCGTCAAGG TGACCGAGGT CGATCCGATC
TGCGCGCTGC AAGCCGCCAT GGACGGGTTC GAGGTGGTGC TGCTGGAGGA TGTGGTCGCA
ACCGCCGACA TCTTCGTCTC AACCACCGGC AACAAGGACG TGATCCGCAT CGAGCACATG
CGCGAGATGA AGGACATGGC CATCGTCGGC AATATCGGCC ATTTCGACAA CGAGATCCAG
GTCGCGGCGC TGCGCAACCA CAAATGGACC AACGTCAAGG AACAGGTGGA CATGATCGAG
ATGCCCTCGG GCAATCGCAT CATCCTGCTG TCCGAAGGCC GGCTGCTGAA CCTGGGCAAC
GCGACCGGGC ATCCCAGCTT CGTGATGTCG GCAAGCTTCA CCAACCAGGT TCTGGCCCAG
ATCGAGCTGT GGACCAAGAA CGACGAATAT GCGCCGGGGG TCTATATCCT GCCCAAGGCG
CTGGACGAAA AGGTCGCCCG GCTGCATCTG GACAAGATCG GCGTCAAGCT GACCAAGCTC
AGCCGGGAAC AGGCCGATTA CATCGGCGTG ACCCCGGAAG GGCCGTTCAA GGCGGAGCAT
TACCGTTACT GA
 
Protein sequence
MTDSIIRDIA LADYGRKELD IAETEMPGLM ALRAEYGEAK PLKGARIAGS LHMTVQTAVL 
IETLVALGAE VRWASCNIFS TQDHAAAAIA KAGIPVFAVK GETLPEYWSY TDQIFQFAEG
PANMILDDGG DATMYVLLGA RVEAGETGLI DVPTSEEEEA LFAQIRKRLE ASPGWFTRQR
DAIRGVSEET TTGVHRLYDL HKKGLLPFPA INVNDSVTKS KFDNKYGCKE SLVDGIRRAT
DVMMAGKVAV VCGYGDVGKG SAASLRGAGA RVKVTEVDPI CALQAAMDGF EVVLLEDVVA
TADIFVSTTG NKDVIRIEHM REMKDMAIVG NIGHFDNEIQ VAALRNHKWT NVKEQVDMIE
MPSGNRIILL SEGRLLNLGN ATGHPSFVMS ASFTNQVLAQ IELWTKNDEY APGVYILPKA
LDEKVARLHL DKIGVKLTKL SREQADYIGV TPEGPFKAEH YRY