Gene Pden_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2616 
Symbol 
ID4580715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2630065 
End bp2631792 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content72% 
IMG OID639769945 
Producthypothetical protein 
Protein accessionYP_916399 
Protein GI119385343 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.243434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGCG GGGAACTGCT GTTCCAGGCC GACTACCCGG CCACGCTGGA CCGGCTTTGC 
CGCGACCTGA CCTGCGCCCG CGCCGAGATC TGGAGCTTCG ACGACGCCCC GACCCGCCGC
GCGGCCGAGC AGGCACTGGC GGCACGCGGG GTCCGGGCGC GCTGCCGTTC GGCCTACAAG
CCCCTGCTGC ATGCCTTTCT GGAAGAGATC CAGACCGAGG GGCTGGCCGT TGCCGAAATC
GCCTGCCCGC GCCATCCTCA GGCCGTCCCC GGCCGCTTTC TGCTGGAGGC CTATCCGCTG
CCGGCGCTGT TTCCACTGGC CGATTTCCGT TTCAGCGAGG GGCGGGAAAG CGAAGCGATG
CCGGTCTATC GCCTGCGGCT GGGCTATGCC TCGGGCGAGG TCCGGCACGC AACGGTGCCG
GCGCCGAACC GCCCGCACCG CGACCATGCC GGCGGCATGG CGCTGTCGCC CTGCGGCTGG
CTGATCCGCG ACGGGCTGGC AGAGGCGCTG GAGACCGATT ACGAGGCGCT GTTCCACGAC
ACGATGCGCG CCATCGCTGC CGCGCCCTGG TCGGGCGAAC CCTGTTTTCA GGAGCTGAAC
ATCGCCGTCA CCCTGCCGGT GCGCGACCAG TCGCTGGATT GGGGCGCCGA GGCGGTATCG
CTGGCCGAGG CGCTGCACGA AGATCTTTAT TTCTCGCTGA TCGAGCATTT CCAATGCCGC
TTCGGCCGTC CGTCCGGCGA CCGCAGCCTG CGGCTGGGCC AGATCGTGCC CGAGATCCGC
CATGGTCCGC GCCACGCAGT CCGGGTCAGG GTCCGCGATT GGGACCGCAG CCCGGCCGGC
GGTGCGCGCT GGCAGCGGCT CGACCGGGCG CACGCGCCGC TGGCTCTGGC GCAGATCGCC
CGCGAACTGG CGCGGTTGCC GGGCGTGCCC TTTGCCGCCC GGTCCGTCGC CGGCAGGCCG
GTCGAGGCGC GGTATCTGCC GGGGCGCGAC CGGGCGGTGA TGATTTCGGC CGGGCAGCAT
GCCAACGAGG TCTCGGGCCC GGTCGGCGCC TTGCGTGCGG CGCAGGAACT GGCGCGGCGC
GAGGGGGCGC ATTTCACGCT TTGCCCGCTG GAGAATCCCG ACGGCTATGC GCTGCGCCAG
CGGCTGGCGG GGGCTGCGCC GCGCCACATG CTGCATGCCG CGCGCTATAC CGCGCTGGGG
GACGATCTGG AGCATCGCCA CGAGCCGCCC GAGGCCGAGC GCGGCATCCG CGATCAGGCC
CTGCGGCTGA GCGGTGCGCT GCTGCATGTC AGCCTGCACG GCTATCCGGC GCATGAATGG
ACGCGGCCGC TCAGCGGCTA TGTCCCGCGC GGCTTTCGGG ACTGGACCCT GCCGCGCGGT
TTCTTCCTGA TCCTGCGCCA CCATCCGGGT TGGGCGCGTC CCGCCGCCCT TCTGGCCGAG
GCGGTGATCG CCCGGCTTGC CCGCCTGCCG GACCTGGTCG CCTTCAACGC CGCGCAGCTG
GCGCTGGCGC GGCGCCATGG CGTCGTGCCG CAGGCGCCGG GCGGCTTTGT CCGCATCATT
GCCGAGGATG CGCGCCCGCC GGTGCCGCTG GTGCTGGTGA CGGAATATCC CGACGAGACG
CTGCTGGGTG CCCCCTTCGC CGCCGCGCAT GAGGCGCAGC GCTCCGCCGT AATCGCCGCC
TATGACGCCT TCCAGGAGCT GGACCTAGGC GACCGGCCGG TCGCCTGA
 
Protein sequence
MGGGELLFQA DYPATLDRLC RDLTCARAEI WSFDDAPTRR AAEQALAARG VRARCRSAYK 
PLLHAFLEEI QTEGLAVAEI ACPRHPQAVP GRFLLEAYPL PALFPLADFR FSEGRESEAM
PVYRLRLGYA SGEVRHATVP APNRPHRDHA GGMALSPCGW LIRDGLAEAL ETDYEALFHD
TMRAIAAAPW SGEPCFQELN IAVTLPVRDQ SLDWGAEAVS LAEALHEDLY FSLIEHFQCR
FGRPSGDRSL RLGQIVPEIR HGPRHAVRVR VRDWDRSPAG GARWQRLDRA HAPLALAQIA
RELARLPGVP FAARSVAGRP VEARYLPGRD RAVMISAGQH ANEVSGPVGA LRAAQELARR
EGAHFTLCPL ENPDGYALRQ RLAGAAPRHM LHAARYTALG DDLEHRHEPP EAERGIRDQA
LRLSGALLHV SLHGYPAHEW TRPLSGYVPR GFRDWTLPRG FFLILRHHPG WARPAALLAE
AVIARLARLP DLVAFNAAQL ALARRHGVVP QAPGGFVRII AEDARPPVPL VLVTEYPDET
LLGAPFAAAH EAQRSAVIAA YDAFQELDLG DRPVA