Gene Pden_2601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2601 
Symbol 
ID4580700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2613990 
End bp2614508 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content68% 
IMG OID639769930 
ProductMarR family transcriptional regulator 
Protein accessionYP_916384 
Protein GI119385328 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.62528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACA AGGTAAGCGT CGCGCCGGCG GGCGGGGAAA GCCTGCTGTT TCTGACGGAC 
GATCAGCTTC GCCGCGGGAT CGAGGCGATG TTCTTCGCCT ATCGTGCCTT TACCGCCGAT
CCCGACCTGA TTCTGGCCGA ACTGGATTAC GGCCGCGCCC ATCACCGGGC GATTCACTTC
ATCCATCGCG AGCCGGGCCT GACGGTGACG GCGCTCCTGG ACGTGCTGGG CGTGACCAAG
CAATCGCTGA ACCGGGTGCT GCGCACGCTG ATCGAGGACG GGCTGGTCGA AAGCCGCATC
GGCCGCCGCG ACCGCCGCGA ACGGCAGCTT TACCTGACCG ACAAGGGCGC GGCGCTGGAA
CGCCGGCTGT CCGAGGCGCA GCGCGCCCGC ATGCGCGCCG CCTATCGCGC CGCCGGACCG
CAGGCGGTGG CGGGTTTCCG GCAGGTGCTG GAGGCGATGA TGGACCGCGA CACGCTGCGC
CAGTATCGTG CGCTGAAAGA ACTGCCCGAC ACACCATGA
 
Protein sequence
MQNKVSVAPA GGESLLFLTD DQLRRGIEAM FFAYRAFTAD PDLILAELDY GRAHHRAIHF 
IHREPGLTVT ALLDVLGVTK QSLNRVLRTL IEDGLVESRI GRRDRRERQL YLTDKGAALE
RRLSEAQRAR MRAAYRAAGP QAVAGFRQVL EAMMDRDTLR QYRALKELPD TP