Gene Pden_2585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2585 
Symbol 
ID4580684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2597216 
End bp2597953 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content73% 
IMG OID639769914 
Productcompetence protein F 
Protein accessionYP_916368 
Protein GI119385312 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGCG CATTGCGGCT GGTCTATCCG CCGCAATGCC TGTGCTGCGG CGCGCCGGTC 
GTCGAGGAAA GCGGGCTGTG CCCGGCCTGC TGGCGCGAGG CCGAGTTCAT CACCGGCACC
TGCTGCGCGC GCTGCGGTGC GCCCTTGCCG GACGACGGAT ACGGCGATGG CGGGGACGAG
GCGGCAGGGC TGCTGGTCTG CGACGATTGC ATCGCGATGC CGCGGCCCTG GCAGCAGGCG
CGCGCGGCGC TGGTCTATCG CGGCGCCGGC CGCAGGCTGG CCCTGATGCT GAAACACGGC
GACCGGCTGG ACCTCGCCCC CGCTCTGGGT GGCTGGGTGG CACGGGCGGC GCTGCCGCTG
CTGCGGCCGG ATGCGGTGGT GGTGCCGGTG CCCGTGCATC TGCGCCGGCT GCTGAGACGC
AAATACAACC AGGCCGAGAT GCTGTCGCGG CGTGTCGCCC GCACGCATGG GCTGGCGCAT
CTGCCGGGCG CCCTGCGGCG GCTGCGGCAT ACGCCGATGC AGGATCACGG CAGCGTCCGC
GACCGTTTCG CGAATGTCGA GGGCGCCATC GCCGTTCCTG CACGCATGGC CCCGCGCCTG
CAAGGGCGCC CGGTGCTGCT GGTCGATGAC GTGATGGCGT CGGGGGCGAC GCTGGCCGCC
TCGGCCCAGG CATTGGCGGC AGCGGGGGCA GGGCCGATCT CGGTCGTGGT TCTGGCGCGG
GCGGTCAAGG ATGCATAG
 
Protein sequence
MKGALRLVYP PQCLCCGAPV VEESGLCPAC WREAEFITGT CCARCGAPLP DDGYGDGGDE 
AAGLLVCDDC IAMPRPWQQA RAALVYRGAG RRLALMLKHG DRLDLAPALG GWVARAALPL
LRPDAVVVPV PVHLRRLLRR KYNQAEMLSR RVARTHGLAH LPGALRRLRH TPMQDHGSVR
DRFANVEGAI AVPARMAPRL QGRPVLLVDD VMASGATLAA SAQALAAAGA GPISVVVLAR
AVKDA