Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2585 |
Symbol | |
ID | 4580684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2597216 |
End bp | 2597953 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639769914 |
Product | competence protein F |
Protein accession | YP_916368 |
Protein GI | 119385312 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGCG CATTGCGGCT GGTCTATCCG CCGCAATGCC TGTGCTGCGG CGCGCCGGTC GTCGAGGAAA GCGGGCTGTG CCCGGCCTGC TGGCGCGAGG CCGAGTTCAT CACCGGCACC TGCTGCGCGC GCTGCGGTGC GCCCTTGCCG GACGACGGAT ACGGCGATGG CGGGGACGAG GCGGCAGGGC TGCTGGTCTG CGACGATTGC ATCGCGATGC CGCGGCCCTG GCAGCAGGCG CGCGCGGCGC TGGTCTATCG CGGCGCCGGC CGCAGGCTGG CCCTGATGCT GAAACACGGC GACCGGCTGG ACCTCGCCCC CGCTCTGGGT GGCTGGGTGG CACGGGCGGC GCTGCCGCTG CTGCGGCCGG ATGCGGTGGT GGTGCCGGTG CCCGTGCATC TGCGCCGGCT GCTGAGACGC AAATACAACC AGGCCGAGAT GCTGTCGCGG CGTGTCGCCC GCACGCATGG GCTGGCGCAT CTGCCGGGCG CCCTGCGGCG GCTGCGGCAT ACGCCGATGC AGGATCACGG CAGCGTCCGC GACCGTTTCG CGAATGTCGA GGGCGCCATC GCCGTTCCTG CACGCATGGC CCCGCGCCTG CAAGGGCGCC CGGTGCTGCT GGTCGATGAC GTGATGGCGT CGGGGGCGAC GCTGGCCGCC TCGGCCCAGG CATTGGCGGC AGCGGGGGCA GGGCCGATCT CGGTCGTGGT TCTGGCGCGG GCGGTCAAGG ATGCATAG
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Protein sequence | MKGALRLVYP PQCLCCGAPV VEESGLCPAC WREAEFITGT CCARCGAPLP DDGYGDGGDE AAGLLVCDDC IAMPRPWQQA RAALVYRGAG RRLALMLKHG DRLDLAPALG GWVARAALPL LRPDAVVVPV PVHLRRLLRR KYNQAEMLSR RVARTHGLAH LPGALRRLRH TPMQDHGSVR DRFANVEGAI AVPARMAPRL QGRPVLLVDD VMASGATLAA SAQALAAAGA GPISVVVLAR AVKDA
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