| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2572 |
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| Symbol | |
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| ID | 4579877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2584892 |
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| End bp | 2585626 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639769901 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_916355 |
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| Protein GI | 119385299 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.712481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.356706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACGATA ACCGGGACCA GGGGCAATGC AGGGAGCCAG CCATGACATT CGACCGCCGC
ATCAAGATCG CGCCTTCGAT CCTTTCCGCG GATTTCGCCA ATTTCGGCCA GGAATGCCGT
GCCGTCGAGG ACCAGGGCGC CGACTGGGTC CATGTCGATG TGATGGACGG GCATTTCGTG
CCGAACCTGA CCTTCGGCCC CGCCATGTGC AAGGCGATCC GGCCGCATAT CCGCGGCGTG
ATGGACGTGC ATCTGATGAT CGCCCCGGTC GATCCCTATA TCGAGGCCTT CGCCGAGGCG
GGCAGCGACA TCATCACCGC CCATGTCGAG GCGGGGCCGC ATGTCCACCG CACGCTTCAG
GCCATTCGCG GCGCAGGTGC CAGGGCCGGG CTGGCGCTGA ACCCGGGCAC GCCCGCCGAT
GCGGCGCGAC CCCTGCTGGA CGACGTCGAC CTGATCTGCG TGATGACGGT GAACCCCGGC
TTCGGCGGGC AGAAGTTCAT CCACAGCCAG ATCGAGAAGG TGCGCGAGCT GCGCGCCATG
ATCGGCGACC GGCCGGTCCA TATCGAGATC GACGGCGGGG TCGATCCCAC CACCGCGCCG
CTGGTCGCGG CGGCGGGGGC GGATGTGCTG GTCGCCGGCT CGGCGGTGTT CCGGGGCGGC
TCGGTTTCGA ACAGCGCGCC TTATGGCGAG AACATCCGCG CCATCCGCGA GGCAGCCGAG
GCCGCGACGC GTTGA
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| Protein sequence | MDDNRDQGQC REPAMTFDRR IKIAPSILSA DFANFGQECR AVEDQGADWV HVDVMDGHFV
PNLTFGPAMC KAIRPHIRGV MDVHLMIAPV DPYIEAFAEA GSDIITAHVE AGPHVHRTLQ
AIRGAGARAG LALNPGTPAD AARPLLDDVD LICVMTVNPG FGGQKFIHSQ IEKVRELRAM
IGDRPVHIEI DGGVDPTTAP LVAAAGADVL VAGSAVFRGG SVSNSAPYGE NIRAIREAAE
AATR
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