Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2497 |
Symbol | |
ID | 4580135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2513247 |
End bp | 2515424 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639769826 |
Product | catalase/peroxidase HPI |
Protein accession | YP_916280 |
Protein GI | 119385224 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0376] Catalase (peroxidase I) |
TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.405625 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGGAA ACGATATCAG GAGCACCGGC AAATGCCCGG TGATGCATGG CGGTAACACC GCGATGGGCA GCTCGGTCAC GGCCTGGTGG CCCAATGCGC TGAACCTCGA CATCCTGCAC CAGCACGACA GCAAGACCAA TCCGCTGGGC CAGGACTTCA ACTATAGCGA AGAGCTGAAA AAGCTGGACG TCGAGGCGCT GAAGGCCGAC CTGCGCGCGC TGATGACCGA CAGCCAGGAC TGGTGGCCGG CCGACTGGGG CAGCTATGTC GGCATGTTCG CCCGCACCGC CTGGCACATG GCCGGTTCCT ACCGGACCAG CGACGGCCGT GGCGGCGCCA ATACCGGCAA CCAGCGCTTT GCGCCGCTGA ACAGCTGGCC GGACAACGTC AACACCGACA AGGGCCGCCG CCTGCTGTGG CCGATCAAGA AGAAATACGG CAACAAGATC TCCTGGGCCG ACCTGATCGT GCTGGCCGGC ACCGTCGCCT ACGAGGCCGC GGGCCTCAAG ACCTATGGCT TCGCCTTCGG CCGCGAGGAT ATCTGGCACC CCGAAAAGGA CACCTACTGG GGCGAGGAAA AGGAATGGCT GGCCCCCAGC GACAGCCGCT ATGGCGACGT GACCAAGGCC GAAACGCTGG CCAACCCGCT GGCCGCCGTG CAGATGGGCC TGATCTACGT CAACCCCGAG GGGGTGAACG GCAAGTCCGA CCCGCAGGCC ACCGCCTACC AGATGCGCGA GACCTTTGCC CGCATGGGCA TGAACGATGA GGAAACCGTG GCGCTGACCG CCGGCGGCCA CACCGTCGGC AAGTGCCACG GCAACGGCAA TGTCACCGAC CTCAGCCCCG ATCCCGAGGC CGCCGGGCCG GAGTTCCAGG GCCTGGGCTG GATGAACACC AAGGGCCGCG GCATCGGGCG CAACACCATG GTCTCGGGCC TGGAAGGCGC CTGGACGACC CACCCGACGC AATGGGACAA CGGCTTCTTC GAAATGCTGT TCAAGCATGA ATGGACGCTG ACCCACAGCC CGGCGGGCGC CTCGCAATGG GAACCGATCA CCATTGCCGA AGAGGACAAG CCGGCCGATG TCGAGGATCC CTCGATCCGC CACATGCCGA TGATGACCGA TGCCGACATG GCGCTGAAGG TGGACCCGAT CTATCGCGAG ATCTCGCTGC GCTTCATGAA CGACTTCGAG GCGTTCAGCG ACGCCTTCGC CCGCGCCTGG TTCAAGCTGA CCCATCGCGA CATGGGGCCG AAGGCGCGCT ACCTGGGCCC GGACGTCCCG GCCGAGGACC TGGTCTGGCA AGACCCGATC CCCGCCGGCC GCAGCGACTA CGACGTGGCG GCGGTCAAGG CCCGGATCGC GGCTTCGGGG CTCAGCGCCT CGGATCTGGT CGCCACCGCC TGGGACAGCG CGCGGACCTA TCGCGGCTCG GACCATCGCG GCGGCGCCAA CGGCGCGCGC ATCCGCCTGG CCCCGCAGAA GGACTGGGAA GGCAACGAGC CCCAGCGCCT GGCCCGCGTG CTGTCGGTGC TTGAACCCAT CGCGGCCGAG ACCGGCGCAA GCCTTGCCGA CGTCATCGTG CTGGGCGGCA ACCTGGGCGT GGAGCAGGCC GCGAAAGCCG CCGGCTTCGA CATCGAGGTG CCCTTCGCAC CGGGTCGCGG CGATTCAACG GCCGAGCAGA CCGATGCCGC GTCCTTCGAC GTGCTCGAAC CGCTGGCCGA CGGTTTCCGC AACTGGCAGA AGCAGGACTA TGTCGTCAGC CCCGAGGAAA TGCTGCTGGA CCGCGCCCAG CTCATGGGTC TGACCGCCCC CGAGATGACC ACGCTGATCG GCGGGCTGCG GGTGATCGGC ACCAACCATG GCGGCACCAA GCATGGCGTG TTCACCCAGC GCAAGGGTGC GCTGACGAAC GACTTCTTCG TGACGCTGAC CGACATGGCC AACAACTGGG TGCCGGTGGG CAACAACCTC TATGAGATCC GCGACCGCAA GACCGGGGCG ACCAGATACA CCGCGACCCG CGTGGACCTG GTGTTCGGCT CGAACTCGAT CCTGCGCGCC TATGCCGAGG TCTATGCCCA GGACGACAAT GCCGGGAAAT TCGTGCGCGA TTTCGTGGCA GCCTGGACCA AGGTGATGAA CGCCGACCGC TTCGACCTGG CGGCCTGA
|
Protein sequence | MDGNDIRSTG KCPVMHGGNT AMGSSVTAWW PNALNLDILH QHDSKTNPLG QDFNYSEELK KLDVEALKAD LRALMTDSQD WWPADWGSYV GMFARTAWHM AGSYRTSDGR GGANTGNQRF APLNSWPDNV NTDKGRRLLW PIKKKYGNKI SWADLIVLAG TVAYEAAGLK TYGFAFGRED IWHPEKDTYW GEEKEWLAPS DSRYGDVTKA ETLANPLAAV QMGLIYVNPE GVNGKSDPQA TAYQMRETFA RMGMNDEETV ALTAGGHTVG KCHGNGNVTD LSPDPEAAGP EFQGLGWMNT KGRGIGRNTM VSGLEGAWTT HPTQWDNGFF EMLFKHEWTL THSPAGASQW EPITIAEEDK PADVEDPSIR HMPMMTDADM ALKVDPIYRE ISLRFMNDFE AFSDAFARAW FKLTHRDMGP KARYLGPDVP AEDLVWQDPI PAGRSDYDVA AVKARIAASG LSASDLVATA WDSARTYRGS DHRGGANGAR IRLAPQKDWE GNEPQRLARV LSVLEPIAAE TGASLADVIV LGGNLGVEQA AKAAGFDIEV PFAPGRGDST AEQTDAASFD VLEPLADGFR NWQKQDYVVS PEEMLLDRAQ LMGLTAPEMT TLIGGLRVIG TNHGGTKHGV FTQRKGALTN DFFVTLTDMA NNWVPVGNNL YEIRDRKTGA TRYTATRVDL VFGSNSILRA YAEVYAQDDN AGKFVRDFVA AWTKVMNADR FDLAA
|
| |