| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2448 |
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| Symbol | |
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| ID | 4580781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2454104 |
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| End bp | 2455141 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639769777 |
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| Product | hypothetical protein |
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| Protein accession | YP_916231 |
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| Protein GI | 119385175 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00427442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATG CGGCCCGGCC TGCGCGCCCG GATCTGACGG GGAACCCGCC CCCACCCGCC
GGCATCGAGG CCTTCGCCCT GATGCGGCGG CTGGAATCGC CCGGCCGCCG CTTCGGCCAT
GCCGGCGGCC CCGAGCAGGA GCCCGCGCGG CTGGGGCAGG AAATCCGCCT GGGCCCCGCC
GCCTGCGAGG TCGCGCGCTT CAGCCCCGCC GAAGGCGACG CCCCCGCCCG CATCGCGCTG
GAGATCACCG GGCTTTTCGG CCCCGAAGGC CCGATGCCGC TGCATCTGAG CCGCCGCATG
CTGGAACGCA TGTCCGAACG CTGGTTCGCC GGCTCCGCCC TGCCGGAACC GGGGGCGGAT
CGCGCCTTCC TGGAGTTCTG CAACCTGCTC CAGCACCGGA TGATGGCGCT TTACTATCGC
GCCTTTGCCG AGGCCCAGCC CGCCATCGCC GCCGATCACG GGCGCGAGGG CAGGCTTTCG
GCGATGATCG CGGCGCTGGC CGGCCTCGGC CTGCCCGGCA CCGCCGAGGC GCTGGACGAT
CCCGCGCCTG CCCTGCGCCA CGCCACCGGG CTGGCCAGCC AGATCCGCAG CCCCGAGACG
CTGGCGGCGC TGCTGTCGGA CCTGCTGGAC GCGCCGGTGC GGGTGGCGGA ATTCGTGCCG
TATTGGCAAG AGATCCCCGC CACCCTGGCC AGCCGACTCG GCCGTACCCA TGCCGGGCTG
GGCCGGGGCG CGATGCTGGG TCCGCGGGCC TATCAGCCGC AGGCCCGGGC CGAGATCGTC
GTCGGCCCGC TGACGCTTGC GCAATACCGC AGGCTGATCG AGGACGGGCC GGCAAGGGCG
GCGCTGCGCC GCCTGCTGCG CTTTGTCATG GGCGAAGAGA TCGGCTTCGA CCTGCGGCTG
GTGCTGGCCG CGCCCGAGGT GCCGGCGCCC ACGCTGGGGT TGGGGCCGGC GTTGGGACAG
ACCGGCTGGC TGGGCGGGGG TGCGGGGCGG GACCGCGACG ACCTGCGCCT GCCGCTGGAT
GAAAGGCAGG CCGCCTGA
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| Protein sequence | MADAARPARP DLTGNPPPPA GIEAFALMRR LESPGRRFGH AGGPEQEPAR LGQEIRLGPA
ACEVARFSPA EGDAPARIAL EITGLFGPEG PMPLHLSRRM LERMSERWFA GSALPEPGAD
RAFLEFCNLL QHRMMALYYR AFAEAQPAIA ADHGREGRLS AMIAALAGLG LPGTAEALDD
PAPALRHATG LASQIRSPET LAALLSDLLD APVRVAEFVP YWQEIPATLA SRLGRTHAGL
GRGAMLGPRA YQPQARAEIV VGPLTLAQYR RLIEDGPARA ALRRLLRFVM GEEIGFDLRL
VLAAPEVPAP TLGLGPALGQ TGWLGGGAGR DRDDLRLPLD ERQAA
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