Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2440 |
Symbol | |
ID | 4580773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2442469 |
End bp | 2445216 |
Gene Length | 2748 bp |
Protein Length | 915 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639769769 |
Product | ATPase |
Protein accession | YP_916223 |
Protein GI | 119385167 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.217736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.396011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCG TGACGCCCCG CGCCCCCGCC AGAGGTTCCA GAGAGACGGT CAAGCGCAAG GAGCTGGTCG GCCGGCTGGA CCCGCTGTGC CTGCGGGCGT TTTCCGACGG CGCGCGCAAC GCCAAGGCGC GCGGCAATCC TTATGTCGAG CTGGTGCATT TCATTGCCGC GCTGGCCGGG ATGCCGGATT CGGACCTGTC GCTGATCGCC GCGGCGGCCG GGGTCGACGC CGCCCGGCTG GAGGGCGACC TGGCCCGGGC GCTGGACGCC CTGCCGCGTG GCGCCAGCGC GGTCGAGGAG TTTTCCGACC ACATCTTTCA CGCCATCCAG GAGGGCTGGA CCCTGGCCGC GCTGGAGGGC GGCACCGATC GGGTGCGTTC GGGCGACATC CTGGTCGCCT GCCTCAAGAC CCCGGTGCTG GAGGGGTTGC TGCTGCGCAT CAGCCCGGAG TTCGGCCGCA TCGACCCCGA CCGCATGGCG CCGGACCTGC CCGGCATCCT GGCCGGCTCG GCCGAGGCGG AGGGGACGGC CCCGCCCGAG ATGGCGCCGG CCAACGTGCC GAAACCGCCC GAGGGGGCGC TGGCGAAATA CGCCACCAAC CTGACCGAGC GGGCGCGGGC CGGCAAGATC GACCCGGTGG TCGGCCGCGA CCCGGAAATC CGCCAGATCA TCGACATCCT GATGCGGCGG CGGCAGAACA ACCCGATCCT GACCGGCGAG GCAGGGGTGG GCAAGACCGC CGTGGTCGAG GGCTTTGCCC TGCGGCTGGC GCGCGGCGAC GTGCCGCCGC AACTGGCCGC GGTCGATCTG TGGCTGCTGG ACATCGGGCT GATGCAGGCC GGCGCCAGCG TCAAGGGCGA GTTCGAAAAG CGGCTGAAAT CGGTGATCGA CGAGGTGCAG GCTTCGGTGA AATCGGTGAT CCTGTTCATC GACGAGGCGC ATACGCTGAT CGGTGCCGGC GGCGCGGCGG GAACGGGCGA TGCCGCGAAC CTGCTGAAAC CCGCGCTGGC GCGGGGCGAG TTGCGCACCG TCGCCGCCAC CACCTGGGCC GAATACAAGC AGCATATCGA AAAGGATCCG GCGCTGACCC GGCGCTTTCA GGTGGTGAAG GTCGAGGAGC CATCGGAGGC GGCCGCCGTC GAGATGCTGC GCGGCGTGGC GGGCGTGCTG GAAAAGCACC ACCGGGTCGA GATCCTGGAC GAGGCGATCG GGGCCGCGGT TTCGCTGTCG CATCGCTATA TCCCGGCGCG GCAATTGCCG GACAAGGCGA TCAGCCTTCT CGACACCGCC TGCGCCCGCG TCGCCGTCAG CCAGCACGCC ACGCCCGCCG AGTTGGAGGA TCTGGAGCGT CGCCTGCAGG CGCTGGAGAT CGAGGCGGGC ATCATCGCCC GCGAGGCCGC CATCGGGATC GACACGACCG AGCGCCAGGC CGCCAACGAC GCCGCCCGCA CCGCGACGGA GGCCGAGCGC GCGGCCGCGC TGGAACGCTG GGAGGCGGAA AAGGCGCTGG TCTCGGACAT CCTGACCTTG CGGGCCGAGT TGCGCGGCGA GGGCATGGCA CTGGACGAGA CGGGGGCGAA CGAGGCGGGG GCGGATACGG ACGGCGCTGA TAGGTTGCCC CCAGCCTCTG CGGAAACCGA GGCGGCCGAC CCCCCCGACA CCGCCGCGCG GCTGGCACTT TTGCGCACCA AGATGGCCGA ACTGGCCGAA AGGCAGGGTG AGCGGCCCTT GATCCTGCCC TCGGTGGACC GGCTGGCGGT GGGGGCGGTG GTGCAGGACT GGACCGGCAT CCCGCTGGGC CGGATGCTGG CCAGCCAGAC CGAGCGCGCG CTGGGCCTTG CGGGCCTGCT CGCGCAGCGC GTCGTCGGTC AGGACCATGC CATGGCCACC ATCGCCAGCC GCATCCAGAC CGGCATGGCC GGGCTGGGCG CGCCGGAAAA GCCGATGGGC GTCTTCATGC TCTGCGGTCC CTCGGGCGTC GGCAAGACCG AGACCGCGCT GGCGCTGGCC GACGCGCTTT ACGGCGGCGA GCAGAACCTG ATTTCCATCA ACATGAGCGA GTTCCAGGAG GCGCATACCG TCTCGACCCT CAAGGGCGCG CCGCCGGGCT ATGTCGGCTA TGGCAAGGGC GGCGTGCTGA CCGAGGCGGT GCGGCGCCGG CCCTATTCGG TGATCCTGCT CGACGAGGTG GAAAAGGCCC ATCCCGACGT GCACGAGATC TTTTTCCAGG TCTTCGACAA GGGGATGATG GACGACAGCG AGGGGCGGCG GATCGACTTT CGCAACACGC TGATCCTGAT GACCTCGAAT GTCGGCACCG ACGAGATCAT GGCGCTGACC GATGCCGGCC GCACCCGGGT CGAGATCGAC AGCCTGTCGG CCGCGCTGCG CCCGCCCTTG CTGAAGGTGT TTCCCCCGGC GCTGCTGGGG CGGCTGGTGA CGATTCCCTA CCTGCCGCTT TCGGATGCGA TGATCGAGGC CATCGCCGGG CAGAAGCTGG CCGGCATCGG CCGCAGGCTG GCCGCCGCGC ATGGCGCCGA ACTGGTGATC GGCGCGGGAG TCATGGAGCA GATCCGCGCC CGCTGCACCG AGGTCGAATC GGGCGGCCGC ATGATCGACG CCATCCTGAC CGGCGCGATC CTGCCCGAAC TCAGCCGCCG GGTGCTGGAT GCCAGGCTGG AAGGGCGCGG CATCGGCAGG GTGACGGTGA CCGGCGGGCC GGACGGCTTC GGCTATGCGC TGGACTGA
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Protein sequence | MTTVTPRAPA RGSRETVKRK ELVGRLDPLC LRAFSDGARN AKARGNPYVE LVHFIAALAG MPDSDLSLIA AAAGVDAARL EGDLARALDA LPRGASAVEE FSDHIFHAIQ EGWTLAALEG GTDRVRSGDI LVACLKTPVL EGLLLRISPE FGRIDPDRMA PDLPGILAGS AEAEGTAPPE MAPANVPKPP EGALAKYATN LTERARAGKI DPVVGRDPEI RQIIDILMRR RQNNPILTGE AGVGKTAVVE GFALRLARGD VPPQLAAVDL WLLDIGLMQA GASVKGEFEK RLKSVIDEVQ ASVKSVILFI DEAHTLIGAG GAAGTGDAAN LLKPALARGE LRTVAATTWA EYKQHIEKDP ALTRRFQVVK VEEPSEAAAV EMLRGVAGVL EKHHRVEILD EAIGAAVSLS HRYIPARQLP DKAISLLDTA CARVAVSQHA TPAELEDLER RLQALEIEAG IIAREAAIGI DTTERQAAND AARTATEAER AAALERWEAE KALVSDILTL RAELRGEGMA LDETGANEAG ADTDGADRLP PASAETEAAD PPDTAARLAL LRTKMAELAE RQGERPLILP SVDRLAVGAV VQDWTGIPLG RMLASQTERA LGLAGLLAQR VVGQDHAMAT IASRIQTGMA GLGAPEKPMG VFMLCGPSGV GKTETALALA DALYGGEQNL ISINMSEFQE AHTVSTLKGA PPGYVGYGKG GVLTEAVRRR PYSVILLDEV EKAHPDVHEI FFQVFDKGMM DDSEGRRIDF RNTLILMTSN VGTDEIMALT DAGRTRVEID SLSAALRPPL LKVFPPALLG RLVTIPYLPL SDAMIEAIAG QKLAGIGRRL AAAHGAELVI GAGVMEQIRA RCTEVESGGR MIDAILTGAI LPELSRRVLD ARLEGRGIGR VTVTGGPDGF GYALD
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