Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2248 |
Symbol | |
ID | 4579302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2250063 |
End bp | 2250689 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639769578 |
Product | NADH dehydrogenase subunit C |
Protein accession | YP_916036 |
Protein GI | 119384980 |
COG category | [C] Energy production and conversion |
COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0117858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.111894 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAG CCCTCTCTGA CGAAGCCCTG CTGGAACTGG CCGAGCATAT CGCGCTCCGC CGCGAGAACG ACGTGATCTC GACCCAGGTC GCCTTCGGCG AGCTGACGGT CAATGCCACG CTGTCGGGCG TGATCGGCCT GATCGAATTC CTGCGCAACG ATCCGAACTG CCGCTTTTCC ACGCTGATCG ACATTACCGC CGTGGACAAC CCGGCACGGC CTGCGCGTTT CGACGTGGTC TATCACCTGC TGTCGATGTA TCAAAACCAG CGCATCCGGG TTAAGGTCCA GGTGCGCGAG GACGAGCTGG TTCCCAGCCT GATCGGCGTA TTCCCCGGCG CCAACTGGTA TGAGCGCGAG GTCTTCGACC TGTTCGGCAT CCTGTTCTCG GGCCATTCGG ACCTGCGCCG CATCCTGACC GATTACGGTT TCCGCGGCCA CCCGCTGCGC AAGGATTTCC CGACCACAGG CTATGTCGAG GTGCGCTGGA GCGACATCGA GAAGCGCGTG GTCTACGAGC CGGTGAACCT GGTTCAGGAA TACCGCCAGT TCGACTTCCT GTCCCCCTGG GAGGGCGCGA AATACGTGCT TCCGGGCGAC GAGAAGGCGC CGGAGGCGAA GAAGTGA
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Protein sequence | MSEALSDEAL LELAEHIALR RENDVISTQV AFGELTVNAT LSGVIGLIEF LRNDPNCRFS TLIDITAVDN PARPARFDVV YHLLSMYQNQ RIRVKVQVRE DELVPSLIGV FPGANWYERE VFDLFGILFS GHSDLRRILT DYGFRGHPLR KDFPTTGYVE VRWSDIEKRV VYEPVNLVQE YRQFDFLSPW EGAKYVLPGD EKAPEAKK
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