Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2233 |
Symbol | |
ID | 4579287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2236525 |
End bp | 2238636 |
Gene Length | 2112 bp |
Protein Length | 703 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639769563 |
Product | NADH dehydrogenase subunit L |
Protein accession | YP_916021 |
Protein GI | 119384965 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.441598 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAT TCGTCCTCTT TGCGCCGCTC ATCGCGTCGC TGATCGCCGG GCTGGGCTGG CGGGCGATCG GCGAGAAGGC AGCGCAATAC CTGACCACGG GCGTGCTGTT CCTCAGCTGC CTGATCAGCT GGTACCTGTT TCTGTCCTTC GACGGCGTGC CGCGGCATAT CCCGGTGCTC GACTGGGTCG TGACCGGCGA TTTCCATGCC GAATGGGCGA TCCGGCTGGA CCGGCTGACC GCGATCATGC TGATCGTCGT GACCACCGTT TCGGCGCTCG TGCACATGTA TTCGCTGGGC TACATGGCCC ATGACGACAA CTGGACGCAT GACGAGCACT ACAAGGCCCG CTTCTTCGCC TATCTCTCGT TCTTCACCTT CGCCATGCTG ATGCTGGTGA CGGCGGACAA CCTGTTGCAG ATGTTCTTCG GCTGGGAGGG CGTGGGCGTC GCCTCCTACC TACTGATCGG ATTCTACTAC AAGAAGGCCA GCGCCAATGC CGCGGCGATG AAGGCGTTCA TCGTCAACCG GGTCGGCGAC TTCGGCTTCC TGCTGGGTAT CTTCGGCATC TACTGGCTGA CCGGCTCGGT CCAGTTCGAC GAGATCTTCC GCCAGGTGCC GCAGCTCGCG CAGACCGAGA TGCATTTCCT GTGGCGCGAC TGGAACGCCG CGAACCTGCT GGGTTTCCTG CTGTTCGTCG GCGCCATGGG CAAGTCGGCG CAGCTCTTGC TGCACACCTG GCTGCCGGAC GCGATGGAAG GCCCGACCCC GGTTTCGGCG CTGATCCATG CCGCGACCAT GGTGACGGCC GGCGTGTTCC TGGTCTGCCG CATGTCGCCG CTTTACGAAT TCGCGCCGGA TGCCAAGAAC TTCATCGTCA TCATCGGCGC CACCACCGCC TTCTTCGCCG CGACCGTCGG CCTGGTGCAG AACGACATCA AGCGCGTCAT CGCCTATTCG ACCTGTTCGC AGTTGGGCTA CATGTTCGTG GCGGCGGGTG TCGGCGTCTA TTCGGCGGCC ATGTTCCACC TGCTGACGCA CGCTTTCTTC AAGGCCATGC TGTTCCTGGG CGCCGGCTCG GTGATCCATG CCATGCACCA TGAACAGGAC ATGCGGAACT ATGGCGGGCT GCGGAAGAAG ATCCCGCTGA CCTTCTGGGC GATGATGATC GGCACCTTCG CCATCACCGG CGTCGGCATT CCGCTGACCC ACCTGGGCTT TGCCGGTTTC CTGTCCAAGG ACGCGATCAT CGAAAGCGCC TATGCGGGCA GCGGCTATGC CTTCTGGCTG CTGGTCATCG CGGCCTGTTT CACCAGCTTC TACAGCTGGC GGCTGATCTT CCTGACCTTC TACGGCAAGC CGCGCGGCGA CCATCACGCC CATGATCATG CGCATGAAAG CCCGCCGGTG ATGACGATCC CGCTGGGCGT GCTGGCCATC GGCGCGGTCT TTGCCGGCAT GGTCTGGTAT GGTCCCTTCT TCGGCGACCA TCACAAGGTC ACGGAATATT TCCACATCGC CGGCGCGCAT CACGAAGCGG CCGAGGGCGA AGAAGCAGAG CACGCGACCG CCGAGGCTCC GGTGGAGCAC GCCGTCGCCG ATACCGCGAC CGCCGAGGGC GAAGCGGCCG CCGAGGCCGA ACATGCCGAG ATCGCCGCGC CGGTCGGCGG TGCGATCTAC ATGCATCCCG ACAACCACAT CATGGACGAG GCGCACCATG CGCCGGCCTG GGTGAAGGTC TCGCCCTTCG TCGCCATGGT GCTGGGGCTG ATCACCGCCT GGACATTCTA CATCGCCAAC CCGTCGCTGC CGCGGCGGCT GGCGGCGCAG CAGCCGGCGC TGTATCGGTT CCTGCTCAAC AAATGGTATT TCGACGAGAT CTACGAGTTC ATCTTCGTCC GCCCGGCGAA ATGGCTTGGC CGCGTGCTGT GGAAGGGCGG CGACGGCGCC GTCATCGACG GCACCATCAA CGGGGTGGCC ATGGGCTTGA TCCCGCGGCT GACCCGCGCG GCGGTCCGGG TGCAATCGGG CTATCTGTTC CACTACGCCT TCGCGATGGT TCTGGGCATC GTGGGCTTGC TGATCTGGGT GATGATGCGG GGCGCGCACT GA
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Protein sequence | MEKFVLFAPL IASLIAGLGW RAIGEKAAQY LTTGVLFLSC LISWYLFLSF DGVPRHIPVL DWVVTGDFHA EWAIRLDRLT AIMLIVVTTV SALVHMYSLG YMAHDDNWTH DEHYKARFFA YLSFFTFAML MLVTADNLLQ MFFGWEGVGV ASYLLIGFYY KKASANAAAM KAFIVNRVGD FGFLLGIFGI YWLTGSVQFD EIFRQVPQLA QTEMHFLWRD WNAANLLGFL LFVGAMGKSA QLLLHTWLPD AMEGPTPVSA LIHAATMVTA GVFLVCRMSP LYEFAPDAKN FIVIIGATTA FFAATVGLVQ NDIKRVIAYS TCSQLGYMFV AAGVGVYSAA MFHLLTHAFF KAMLFLGAGS VIHAMHHEQD MRNYGGLRKK IPLTFWAMMI GTFAITGVGI PLTHLGFAGF LSKDAIIESA YAGSGYAFWL LVIAACFTSF YSWRLIFLTF YGKPRGDHHA HDHAHESPPV MTIPLGVLAI GAVFAGMVWY GPFFGDHHKV TEYFHIAGAH HEAAEGEEAE HATAEAPVEH AVADTATAEG EAAAEAEHAE IAAPVGGAIY MHPDNHIMDE AHHAPAWVKV SPFVAMVLGL ITAWTFYIAN PSLPRRLAAQ QPALYRFLLN KWYFDEIYEF IFVRPAKWLG RVLWKGGDGA VIDGTINGVA MGLIPRLTRA AVRVQSGYLF HYAFAMVLGI VGLLIWVMMR GAH
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