| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2231 |
|---|
| Symbol | |
|---|
| ID | 4579285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 2233473 |
|---|
| End bp | 2234972 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639769561 |
|---|
| Product | NADH dehydrogenase subunit N |
|---|
| Protein accession | YP_916019 |
|---|
| Protein GI | 119384963 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
|---|
| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.928007 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGC TCGATTTCTC GACCATTCTG CCCGAGGTGG TGCTGGCCGG TTACGCCCTT
GCCGCCCTGA TGGCGGGGGC CTATCTCGGC AAGGACAGGC TGGCCCGGAC GCTGCTTTGG
GTCACGGTCG CGGCCTTCCT GGTCGTCGCG GCCATGGTGG GCCTCGGCAA CCATGTCGAC
GGCGCCGCCT TCCACGGCAT GTTCATCGAC GACGGCTTCT CGCGCTTTGC CAAGGTGGTG
ACGCTGGTCG CCGCCGCCGG CGTGCTGGCG ATGAGCGCCG ATTACATGCA GCGCCGCAAC
ATGCTGCGCT TCGAGTTCCC GATCATCGTT GCACTGGCGG TGCTGGGCAT GATGTTCATG
GTCTCGGCCG GCGACCTGCT GACGCTCTAC ATGGGGCTGG AGTTGCAATC GCTGGCGCTT
TACGTCGTCG CCGCCATGCG CCGCGACTCG GTGCGCTCGT CCGAGGCGGG GTTGAAATAC
TTCGTGCTGG GATCGCTTTC CTCGGGCCTG CTGCTCTATG GCGCCTCGCT GGTCTACGGT
TTTGCCGGCA CCACCGGGTT CGAGGGCATC ATCTCGACCA TCGAGGCCGG CCACCTGTCC
CTGGGCGTGC TGTTCGGCCT GGTGTTCATG CTGGTGGGCC TGTCGTTCAA GGTTTCGGCC
GTGCCCTTCC ACATGTGGAC GCCCGACGTC TACGAGGGCT CGCCGACGCC GGTCACCGCC
TTCTTCGCCA CCGCGCCCAA GGTCGCGGCC ATGGCGCTGA TCGCGCGGCT GGTCTTCGAC
GCCTTCGGCC ATGTCATCGG CGACTGGAGC CAGATCGTCG CGGCGCTGGC GGTGATGTCG
ATGTTCCTGG GCTCGATCGC CGGGATCGGC CAGACCAACA TCAAGCGGCT GATGGCCTAT
TCCTCGATCG CGCATATGGG CTTTGCCCTT GTCGGCCTTG CCGCCGGCAC CGCCATCGGC
GTGCAGAACA TGCTGCTTTA CATGACCATC TATGCGGTGA TGAACATCGG CACCTTCGCC
TTCATCCTGT CGATGGAGCG CGACGGCGTG CCGGTGACCG ACCTTGCCGC GCTGAACCGC
TTTGCCTGGA CCGATCCGGT CAAGGCGCTG GCGATGCTGG TCCTGATGTT CAGCCTTGCC
GGCGTGCCGC CGACGCTGGG CTTCTTTGCC AAGTTCGGCG TGCTGACGGC GGCGGTCGAT
GCCGGCATGG GCTGGCTGGC GGTGCTGGGC GTGATCGCCT CGGTCATCGG CGCCTTCTAT
TACCTGCGCA TCGTCTATTA CATGTATTTC GGCGGCGAGT CCGAGGGCAT GACCTCGCGC
ATGGGCGCGG TGCAATACCT GGCGCTGATG GTGCCGGCGC TGGCGATGCT GGTGGGTGCG
ATCAGCATGT TCGGCGTCGA TTCCGCCGCC GGCCGCGCCG CCGAGACCCT GGTCGGTCCG
GTGGCCGCCA TCGAGCAGCC CGCCGAAGCC GCGCAAGCCG AGCCCGTGCA AGGTGAGTGA
|
|---|
| Protein sequence | MTSLDFSTIL PEVVLAGYAL AALMAGAYLG KDRLARTLLW VTVAAFLVVA AMVGLGNHVD
GAAFHGMFID DGFSRFAKVV TLVAAAGVLA MSADYMQRRN MLRFEFPIIV ALAVLGMMFM
VSAGDLLTLY MGLELQSLAL YVVAAMRRDS VRSSEAGLKY FVLGSLSSGL LLYGASLVYG
FAGTTGFEGI ISTIEAGHLS LGVLFGLVFM LVGLSFKVSA VPFHMWTPDV YEGSPTPVTA
FFATAPKVAA MALIARLVFD AFGHVIGDWS QIVAALAVMS MFLGSIAGIG QTNIKRLMAY
SSIAHMGFAL VGLAAGTAIG VQNMLLYMTI YAVMNIGTFA FILSMERDGV PVTDLAALNR
FAWTDPVKAL AMLVLMFSLA GVPPTLGFFA KFGVLTAAVD AGMGWLAVLG VIASVIGAFY
YLRIVYYMYF GGESEGMTSR MGAVQYLALM VPALAMLVGA ISMFGVDSAA GRAAETLVGP
VAAIEQPAEA AQAEPVQGE
|
|---|
| |