| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2227 |
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| Symbol | trmB |
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| ID | 4579203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2229547 |
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| End bp | 2230248 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639769557 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_916015 |
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| Protein GI | 119384959 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.128966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGAAT TCGATCCGAA TCCCCCGCGC CGCAACTTCT ACGGTCGCCG CCACGGCAAG
ACCCTGCGCC AAAGCCAGAA GGGCTATCTG TCCGAGGATC TGGGCAGCCT GCGTCCGCGC
GGCATCACCG TCCAGGAGAA CCCCGAGCGC AAGCCCGTCG CGCCCAGCAC GATCTTCGGC
GACGACCGGC CGGTCTGGCT GGAAGTCGGC TTCGGCGGCG GCGAGCACAT GGTCCACATG
GCCGCCCGCT ATCCCGAGAT CGGCATCATC GGCTGCGAGC CTTTCATCAA CGGCGTCGCC
ATGCTCCTGG GCAAGATCCG CGCCGCGGGG GTCGAGAACG TGAGCGTGCA TCCGGGTGAT
GCGCGCGACC TGATGGATGT GCTGCCCGAT GCCTCGATCG ACAAGGCTTT TCTGAACTAT
CCCGACCCCT GGCCCAAGGC CCGCCATCAC CGCCGCCGTT TCGTCACGCC CGAGCACCTC
ATCCCGCTCG CCCGCGTGAT GAAGCCGGGC GCCGAGTTCC GCGTCGCGAC CGACATCCCC
GATTATGTCC GCCAGACGCT GGAAGAGGTG CCGCAGGCCG GCTTCGATCT GGTCGCCGAG
GGGCCGCAGG CATGGGAGGA CTGGCCCAGC ACCCGCTATG AGCAGAAGGC GCTGCGCGAA
GGCCGGGTGC CGCATTACGT CACCTTCCGC CGCCGATCCT GA
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| Protein sequence | MSEFDPNPPR RNFYGRRHGK TLRQSQKGYL SEDLGSLRPR GITVQENPER KPVAPSTIFG
DDRPVWLEVG FGGGEHMVHM AARYPEIGII GCEPFINGVA MLLGKIRAAG VENVSVHPGD
ARDLMDVLPD ASIDKAFLNY PDPWPKARHH RRRFVTPEHL IPLARVMKPG AEFRVATDIP
DYVRQTLEEV PQAGFDLVAE GPQAWEDWPS TRYEQKALRE GRVPHYVTFR RRS
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