Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2219 |
Symbol | upp |
ID | 4579195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2218991 |
End bp | 2219626 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639769549 |
Product | uracil phosphoribosyltransferase |
Protein accession | YP_916007 |
Protein GI | 119384951 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0035] Uracil phosphoribosyltransferase |
TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.584245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCAAG CGCACCTGAC CGTCGTCGAT CACCCGCTGG TGCAGCACAA GCTGACGCTC ATGCGCGACA AGACCACCTC GACCGCCGGC TTTCGCCGTC TCCTGCGCGA GATCAGCCTG CTTCTGGCCT ATGAGGTCAC GCGCGAGCTG GAGATGACCA CGATCCGCAT CGACACCCCG CTTTGCGAGA TGGAGGCGCC GACGCTGGAA GGCAAGAAGC TGGCGCTGAT CTCGATCCTG CGGGCCGGCA ACGGGCTCAT GGACGGCATC CTTGAGCTGA TCCCGGCCGC GCGCGTCGGC TTCATCGGGC TTTACCGCGA CCCCGAGACG CTGCAGCCGG TACAATATTA TTCCAAGGTT CCCAAGGAAT TGGATGCGCG CATGACCATC GTCGTCGATC CGATGCTGGC GACGGGGAAC TCGTCCGTCG CGGCTATCGA CCTGCTCAAG GCGGCAGGCG CGCGCAACCT GCGCTTCCTG TGCCTGCTCG CCTCGCCCGA GGGGGTCGAG CGGATGCGCG AGGCCCACCC CGACGTGCCG ATCGTGACCG CCGCGCTGGA CGAGCGGCTG GACGAGCACG GCTATATCGT GCCGGGCCTG GGCGATGCCG GCGACCGCAT GTTCGGCACG AAATGA
|
Protein sequence | MTQAHLTVVD HPLVQHKLTL MRDKTTSTAG FRRLLREISL LLAYEVTREL EMTTIRIDTP LCEMEAPTLE GKKLALISIL RAGNGLMDGI LELIPAARVG FIGLYRDPET LQPVQYYSKV PKELDARMTI VVDPMLATGN SSVAAIDLLK AAGARNLRFL CLLASPEGVE RMREAHPDVP IVTAALDERL DEHGYIVPGL GDAGDRMFGT K
|
| |