Gene Pden_2192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2192 
Symbol 
ID4579168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2194934 
End bp2196247 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content71% 
IMG OID639769522 
Productglycosyl transferase, group 1 
Protein accessionYP_915980 
Protein GI119384924 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.111626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCAA TTTCGCCGGA CCGGGGCCGC TTTCCGCCTC GCAGGCCAAG GGGCTTCGAC 
GTGTTGAAGA TCGGTTTTTT CATTCCCGAA TTTCCGGGCC AGACCCATAT CTTCCTGTGG
CGCGAACGAC AGGCGCTGGC GGAACTGGGG ATCGAGGCCG AGCTGATCTC GACCCGCCCG
CCGCCGCGCG CCATCGCCTC GCACAGCTGG GCCGCCGAGG CGCAGGCCCG GACCCGCTAC
CTGATACCGC TGGGCAGCGG GGGCCTGGGC ATCGTCGCGG AATTCCTGCG CTCGGGGCCG
GCCGGCTGGA CTCGTGGGCT GGGTGCGGTG CTGACCGCCG AAGCGCAAGG GCTCAAGGGG
CGGCTGCGGA TGCTGGCGCT GCTGGCCATG GGCGCGCGGC TCAAGCGCAT CGCCCGCCAG
CAGGGCTGGG GTCATGTCCA TGTCCACAGC TGTGCCGACA GCGCCAATAT CGCCATGTTC
GCCGAGCGGC TGGGCGGGCC GAGCTACAGC CTGACCCTGC ACGGGCCGAC GCTGGAGGGC
TACGGCCCGA ACCAGCGGCA GAAATGGCGC CATGCGCGTT TCGCCACCAT CATCTCGCAA
TTGCTGGCGG GGGTGGCCGA GCGCGAGATC GGCGCCGACC GCCCCGCCGT GATCAACGTG
GCGCCGATGG GCGTGGATCT CGACCAGATC CGGCGCCAGG CCCCGTGGCA GCCCCCTGCC
CCCGGCGAGC CGCTGCGCAT CTTCGCTTGC GGCCGGCTGA ACGCGGTCAA GGGCCATGAC
CACCTGGTCC GAACGATCGA AATCCTGCGC GCCCGCGGCA TCGACGCCCG GCTGGAGATC
GCCGGAGAGG ACGAGCAGGG CGGCTCGGGC TATCGCCGCC AGCTCGACGC ACTGATCGCC
GAAAAAGGCT TGGGCGATGT CGTCACCCTC TTGGGCGCGG TCAGCGAGGA ACGGGTGCGC
GAGGGGCTGG AGCGCGCGCA TGTCTTTGCC CTGGCCAGCC TGAACGAGGG CATCGCGGTC
GCGATCATGG AGGCGATGGC GATGGAGATG CCGGTGGTCG TCACCGATGT CGGCGGCAAT
CACGAATTGA TCACCTCGGG CCGCGACGCG ATCCTGGTGC CGCCCGAGCG GCCCGAGATC
ATGGCGGACG AGATCGCCCG CCTTCACGCC GACCCCCAGG AGGCGCAGCG GCTGGCGCAG
GCATCCCGCG CCCGCGTCGC CGCCGCGTTC CACCACCGCC GCAGCGCCGA GGCGGTGGCC
GACGGGCTGG CCCGCACCCT GCCCGGCGCA CGCGAGGCGC TGACCCGCGC CTGA
 
Protein sequence
MRPISPDRGR FPPRRPRGFD VLKIGFFIPE FPGQTHIFLW RERQALAELG IEAELISTRP 
PPRAIASHSW AAEAQARTRY LIPLGSGGLG IVAEFLRSGP AGWTRGLGAV LTAEAQGLKG
RLRMLALLAM GARLKRIARQ QGWGHVHVHS CADSANIAMF AERLGGPSYS LTLHGPTLEG
YGPNQRQKWR HARFATIISQ LLAGVAEREI GADRPAVINV APMGVDLDQI RRQAPWQPPA
PGEPLRIFAC GRLNAVKGHD HLVRTIEILR ARGIDARLEI AGEDEQGGSG YRRQLDALIA
EKGLGDVVTL LGAVSEERVR EGLERAHVFA LASLNEGIAV AIMEAMAMEM PVVVTDVGGN
HELITSGRDA ILVPPERPEI MADEIARLHA DPQEAQRLAQ ASRARVAAAF HHRRSAEAVA
DGLARTLPGA REALTRA