Gene Pden_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2178 
Symbol 
ID4579154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2180363 
End bp2180767 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content63% 
IMG OID639769508 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_915966 
Protein GI119384910 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR03081] methylmalonyl-CoA epimerase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.794327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGAC GCCTGAACCA TGTCGCCATC GCCGTGCCCG ACCTGAAGGC CGCGGCCGCG 
CAATATGAAA ACAGCCTTGG CGCCAAGGTC GGTGCGCCGC AGGACGAGCC CGACCACGGC
GTCACCGTCG TCTTCATCGA ACTGCCGAAC ACCAAGATCG AACTGCTCTA TCCGCTGGGC
GACGCAAGCC CGATCAAGGG GTTCCTGGAA AAGAATCCCT CGGGCGGCAT CCATCACATG
TGCTTCGAGG TCGAGGATAT CCTGGCCGCC CGCGACAAGC TGAAGGCCGA GGGTGCGCGC
GTGCTGGGCA ATGGCGAGCC CAAGATCGGG GCGCATGGCA AGCCGGTGCT GTTCCTGCAT
CCCAAGGACT TCAACGGCTG CCTGATCGAG CTGGAGCAGG TCTGA
 
Protein sequence
MIGRLNHVAI AVPDLKAAAA QYENSLGAKV GAPQDEPDHG VTVVFIELPN TKIELLYPLG 
DASPIKGFLE KNPSGGIHHM CFEVEDILAA RDKLKAEGAR VLGNGEPKIG AHGKPVLFLH
PKDFNGCLIE LEQV