Gene Pden_2059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2059 
Symbol 
ID4578923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2066523 
End bp2066894 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content61% 
IMG OID639769389 
ProductIS5 family transposase OrfA 
Protein accessionYP_915847 
Protein GI119384791 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000233096 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGACC TGTACTGGCT GACCGACGAG CAGATGGCCA AGCTTGCCCC TTTCTTCCCG 
AAGTCGCACG GCAAGCCACG CGTCGATGAC AAGCGTGTTC TAAGCGGGAT TATCTTCATC
AATCGCAATG GTTTGCGCTG GCGAGATGCC CCCAGGGAGT ATGGGCCGCA CAAGACGCTC
TACAGCCGGT GGAAGCGTTG GAGCGAGAAA GGCATTTTCG CCAGGATGAT GATCGGGCTG
GCCGCCGACC ACGGCGAGGA AAAGACCGTG ATGATCGACG CGACCTATCT GAAAGCGCAC
CGCACCGCGA CCAGCATGGC CGCGAAAAAG GGGGGCGTGG ACGCCTCGTC GGCCGGACCA
AGGGCGGCAT GA
 
Protein sequence
MSDLYWLTDE QMAKLAPFFP KSHGKPRVDD KRVLSGIIFI NRNGLRWRDA PREYGPHKTL 
YSRWKRWSEK GIFARMMIGL AADHGEEKTV MIDATYLKAH RTATSMAAKK GGVDASSAGP
RAA