| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2054 |
|---|
| Symbol | |
|---|
| ID | 4578918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2061405 |
|---|
| End bp | 2062328 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639769384 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_915842 |
|---|
| Protein GI | 119384786 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000013578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000242077 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAT CACGCTCTTT GAGCACCACC CGTGAACAGA AAGAATTGCC GTTGAGAATC
GCGGCAGAGC GGGAGGTTGA TGGGGTCGAA ATGGGCGTGC TGTCAAATGG CACGTCATAC
CTGACGATCA GGGGGCTGGC GAGGATGTGC GGAGTAGATC ACTCCGTGAT TGTTCGTGTC
ACTGATCAGC TTCTAAACGA CCCCGAAAAG CCACGCGCCC GTCAAATCAG AGAGTTGATC
AAAGGCCAAG GTGGCAATGA TGGGATTGTG TTTTTCCCGG TCGAGAAGAA CGGGGTGCTC
CATCACACAA TCCCGGACAC AGTATGTATG GCGATACTGG AGTATTACGC CTTCGAAGCA
AGAGGCGGAG ACGGTCAGGC TCTCAAGGCA TATCGGGCGC TGGCGCGGAA AGGCTTCCGA
GACTTCATCT ATGCGCAAGT CGGATACAAC CCAAGCGGCG CAGTTGATGT CGCATGGCAG
CAGTATCAGG ACCGCGTGTC GTTGGTCTAT GATAATGTCC CGGCTGGATA TTTCTGTGTA
TTCAAAGAAA TAGCGGAAAT GTTCGTTACC CTGCTGCAAA GCGGGGCGAA GCTTGGCAAC
GGGTTCATCC CCGACATCAG CGTTGGGCAG GCTTGGGGAA AGCACTGGAC GGCGGACAAC
CTAGACAATG TCTATGGGAT GCGGCGGCAG TTCCACCACA ACTACCCGGA CTATTTCCCG
CAATCGGCAT CGAACCCGCA GCCAGCCAAC TGCTATCCCG ACGACGCCCT TCCAGAGTTC
AGGCGCTGGA TGCGTGAGCA CTACCTTGCC AACGGGCTGC CAAAATACTT GGTATCGAAG
GTAAAAGCAG GGCAATTGGA GGCACCCGCC GCTACAATCG CGGTGGAGGC ATTCAAGAAC
CGATCACTCC CCGCCCCGAA ATAA
|
|---|
| Protein sequence | MAKSRSLSTT REQKELPLRI AAEREVDGVE MGVLSNGTSY LTIRGLARMC GVDHSVIVRV
TDQLLNDPEK PRARQIRELI KGQGGNDGIV FFPVEKNGVL HHTIPDTVCM AILEYYAFEA
RGGDGQALKA YRALARKGFR DFIYAQVGYN PSGAVDVAWQ QYQDRVSLVY DNVPAGYFCV
FKEIAEMFVT LLQSGAKLGN GFIPDISVGQ AWGKHWTADN LDNVYGMRRQ FHHNYPDYFP
QSASNPQPAN CYPDDALPEF RRWMREHYLA NGLPKYLVSK VKAGQLEAPA ATIAVEAFKN
RSLPAPK
|
|---|
| |