| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2020 |
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| Symbol | |
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| ID | 4580404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2028070 |
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| End bp | 2029335 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639769349 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_915808 |
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| Protein GI | 119384752 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0398534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCACT TCAACTATGT CGATGGCTGG CTGCATGCCG AGGAGGTGCC GCTGGCCCGC
ATCGCGGCCG AGGTCGGCAC CCCGGTCTAT GTCTATTCCG CCGCCACGCT GACCCGGCAT
TTCAAGCTGT TCCAGCAGGC GCTGGCGTGG ACCGATCACC TGGTCTGCTT TGCGGTCAAG
GCGAATTCGA ACATCGCGGT GCTGAAGCTT CTGGGCGACC TGGGCGCGGG CATGGATATC
GTCTCGGGCG GGGAATATGC GCGCGCCAGG GCGGCGGGCG TGCCGGGCGA GCGGATCGTT
TTCTCGGGCG TCGGCAAGCT CGAACCCGAG ATGCGCATGG CGCTGGAAGG CGGCATCCGC
CAGTTCAACG TCGAATCCGA GCCCGAGCTG GAGCTGCTGT CGCGCGTCGC CTCGTCCATG
GGGGTCGAGG CGCCGATCGC CGTGCGGGTG AACCCGGACG TGGACGCCAG GACGCATGAG
AAGATCGCCA CGGGCAAGTC CGAGAACAAG TTCGGCATCC CCATCGCGCG GGCGCGCGAG
GTCTATGCCC ATGCCGCGCG CCTGCCCGGG ATCAAGGTGG TCGGCATCGA CATGCATATC
GGCAGCCAGC TGACCGACCT GGAGCCCTAT CGCCAAGCCT ATGCCAAGAT GGCCGAACTG
ACCCGCGCGC TGCGCGCCGA CGGGCACCGG ATCACCCGGC TCGACATGGG CGGCGGCCTG
GGCATTCCCT ATCGGCGCGA CAACAATGCG CCGCCCTTGC CCATCGAATA CGGCCAGGTG
ATCCGCGATG CCGTGGGCGA CCTGGGCTGC GAGATCGAGA TCGAGCCGGG GCGCAACATC
GCCGGCAATG CCGGGATCCT GCTTTCCTCG GTGATCTATC TGAAACAGGG CGAGGGGCGG
GATTTCCTGA TCCTCGACGC GGCGATGAAC GATCTGATCC GGCCGGCGAT GTATTCCGCG
CATCACGACA TCGTCCCGGT GCGCGAGGCG GCGCCGGGGG CCGAGGTCGC GCCGCATGAC
GTGGTCGGCC CGGTCTGCGA GACCGGCGAC ACCTTCCAGA AGGCGGTCGA GCTGCCGGCA
TTGGGCCCCG GCGATCTGGT GGCGTTGCGC TCGGCCGGGG CCTATGGCGC GGTGATGGCC
TCGGAATACA ATTCCCGGCC GTTGGTGCCC GAGGTTCTGG TCAGCGCCGA TCAATTCGCC
GTCATTCGGG CGCGGCCGAC GCTTGAGGAA ATGCTGGGAC GCGATACCAT TCCGGAATGG
CTCTGA
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| Protein sequence | MDHFNYVDGW LHAEEVPLAR IAAEVGTPVY VYSAATLTRH FKLFQQALAW TDHLVCFAVK
ANSNIAVLKL LGDLGAGMDI VSGGEYARAR AAGVPGERIV FSGVGKLEPE MRMALEGGIR
QFNVESEPEL ELLSRVASSM GVEAPIAVRV NPDVDARTHE KIATGKSENK FGIPIARARE
VYAHAARLPG IKVVGIDMHI GSQLTDLEPY RQAYAKMAEL TRALRADGHR ITRLDMGGGL
GIPYRRDNNA PPLPIEYGQV IRDAVGDLGC EIEIEPGRNI AGNAGILLSS VIYLKQGEGR
DFLILDAAMN DLIRPAMYSA HHDIVPVREA APGAEVAPHD VVGPVCETGD TFQKAVELPA
LGPGDLVALR SAGAYGAVMA SEYNSRPLVP EVLVSADQFA VIRARPTLEE MLGRDTIPEW
L
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