Gene Pden_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2003 
Symbol 
ID4578672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2009604 
End bp2010026 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content67% 
IMG OID639769332 
ProductAllergen V5/Tpx-1 family protein 
Protein accessionYP_915791 
Protein GI119384735 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGCG CCGTCACCTG CTACCAGACA TCCATGCGTG AAAATGAGGC AGCGGCGCGT 
GCCACCAACG CCACGCGCCA GGCGCGCGGA CTGGCGCCGC TGAAGCCGAA CCAGGACCTT
GCCATGGCGG CAGCCCGCCA TGCTTGCGAC ATGGCCAAGC GTGGGACGAT GTCGCATCGG
GGCGGCAAGA CCAAGGGCCC GATGCAGAGG CTGAAGCAAG AGGGCTACAG GCCCAGCATC
GCGGCCGAGA ATATCGCCGC CGGCCCCTGG GGGCAGGATC GCGTGCTGGT GGAATGGTCG
CGCTCCAGCG GGCATCTGGC CAATATCCTG ATCCCGCAGG TCCGGCATTA CGGCATCGGC
AAGGCGCTGG GGGCGGATGG CAAGACCGTC TATTGGGCGG CGGTCTATAG CGCACCGCGT
TAA
 
Protein sequence
MPGAVTCYQT SMRENEAAAR ATNATRQARG LAPLKPNQDL AMAAARHACD MAKRGTMSHR 
GGKTKGPMQR LKQEGYRPSI AAENIAAGPW GQDRVLVEWS RSSGHLANIL IPQVRHYGIG
KALGADGKTV YWAAVYSAPR