Gene Pden_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1945 
Symbol 
ID4581067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1947281 
End bp1948333 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content72% 
IMG OID639769266 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_915734 
Protein GI119384678 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0410103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00836902 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCTGATCC TTGCAATCAT GCTTGCCGTG CTGGTCGCGG CGCGCCTGCT TGGCTGGCCG 
GCATGGCGCG GCTGGGCGGG TGTGGCGGCG CTGTGGCTGG CTGCCGTTGC CGCGCTGGTG
CTGGCGCCGG GCAGCGGGGT CGCGCACCTG GTCGGCGGCG ATGCCCGGGT CTGGGTGCTG
GGCGGCGGCG TTGTGGCGCT GCTGCTGGGC TATCGCCTGC TGCTGCGCCA GTTGCATCGC
CGGGCCGTTC CCGTGCCGGA GGCCCCGCAG CCGTCAGCGC AATCCGGCCC GCTGTCTGAC
CCCGAGCTTG ACCGCTATGC CCGCCATATC GTGTTGCGCG AACTGGGCGG GCCGGGGCAG
GCGGCCTTGA GGCGCGCCCG CGTGCTGGTG GTCGGCGCAG GCGGGCTGGG CGCGCCGGTC
TGCCTTTATC TTGCTGCCGC TGGCGTTGGG CGGATCACGG TGGCCGACGA CGACCATGTC
GGCCTGTCGA ACCTGCAACG CCAGGTGATA TTCCGCAGCG CCGATGACGG CCGCCCCAAG
GCCGAGGCCG CGCGCGATGC CATGCTGGCG CTGAACCCGC ATGTCGAGGT CGCGGCGCTG
AACCGTCGCA TCACCGATGC CGATGCCGCG CTGATCGCCG AACATGACCT GGTGCTGGAC
GGCACCGACA GCTTCGCCGC GCGCCGTGCG GTGAATGCGG CCTGCGTCGC GGCTGGCGTG
CCGCTGGTCG CCGGCGCCAT CGCGCAATGG GAAGGGCAGG TGACCATCTG GGATCCGCGC
CATGGCGCGC CCTGCATGAC CTGCATTTTC CCCGAGGCGC CGGCCCCGGG CCTTGCGCCG
GCCTGCGCCG AGGCGGGCGT CGTCGGCCCG CTGCCCGGCG TCATCGGCAG CCTGATGGCG
CTGGAGGCGA TCAAGCTGAT TGCCCGCACC GGCGAGCCCT TGCGCGGCCG CATGCTGATC
TTCGACGGGC TTTACGGCGA GAACCGGCTG ATGAAAATCT CGCGACGTGC CGATTGCCCC
ACCTGTGGCT CTGGACATTT CCGCGCAGGC TGA
 
Protein sequence
MLILAIMLAV LVAARLLGWP AWRGWAGVAA LWLAAVAALV LAPGSGVAHL VGGDARVWVL 
GGGVVALLLG YRLLLRQLHR RAVPVPEAPQ PSAQSGPLSD PELDRYARHI VLRELGGPGQ
AALRRARVLV VGAGGLGAPV CLYLAAAGVG RITVADDDHV GLSNLQRQVI FRSADDGRPK
AEAARDAMLA LNPHVEVAAL NRRITDADAA LIAEHDLVLD GTDSFAARRA VNAACVAAGV
PLVAGAIAQW EGQVTIWDPR HGAPCMTCIF PEAPAPGLAP ACAEAGVVGP LPGVIGSLMA
LEAIKLIART GEPLRGRMLI FDGLYGENRL MKISRRADCP TCGSGHFRAG