Gene Pden_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1937 
Symbol 
ID4581059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1936399 
End bp1936866 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content63% 
IMG OID639769258 
Productcytochrome c, class I 
Protein accessionYP_915726 
Protein GI119384670 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00818219 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGATCA GCATCTATGC CACTCTCGCC GCCATCACCC TCGCCCTGCC CGCTGCGGCC 
CAGGATGGCG ACGCCGCCAA AGGCGAGAAA GAATTCAACA AGTGCAAGGC TTGCCACATG
ATCCAGGCGC CGGACGGCAC CGACATCATC AAGGGCGGCA AGACCGGGCC CAACCTTTAC
GGCGTCGTCG GCCGCAAGAT CGCCTCGGAG GAGGGCTTCA AATACGGCGA AGGCATCCTC
GAGGTCGCCG AAAAGAACCC CGACCTGACC TGGACCGAGG CCGACCTGAT CGAATACGTC
ACCGACCCCA AGCCCTGGCT GGTCAAGATG ACCGACGACA AGGGCGCCAA GACCAAGATG
ACCTTCAAGA TGGGCAAGAA CCAGGCCGAC GTGGTGGCCT TCCTGGCCCA GAACTCGCCC
GATGCGGGCG GCGACGGCGA GGCTGCGGCC GAGGGCGAAT CGAACTGA
 
Protein sequence
MKISIYATLA AITLALPAAA QDGDAAKGEK EFNKCKACHM IQAPDGTDII KGGKTGPNLY 
GVVGRKIASE EGFKYGEGIL EVAEKNPDLT WTEADLIEYV TDPKPWLVKM TDDKGAKTKM
TFKMGKNQAD VVAFLAQNSP DAGGDGEAAA EGESN