Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1928 |
Symbol | |
ID | 4580587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1922493 |
End bp | 1923002 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639769249 |
Product | cell wall hydrolase, SleB |
Protein accession | YP_915718 |
Protein GI | 119384662 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.397103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0105522 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATCC TGAACGCAAG GCCATGGGGG GGCGGGCTGT CCCTCCTTCT CGTCCTGCTG GTCGTGGCAG GCTGCGGGAT CGGCCGCCGG CATTCGGAAC TGGAATGCAT GGAACGTGCC ATGTTCTTCG AATCGCACCG CTCCAGCCGC GACGGCATGA TCGCGGTGGG CAGCGTGGTG ATGAACCGCG TCCAGTCGCG CCAATATCCG AACTCGGTCT GCGCCGTGGT GGGACAGAAG GGCCAGTTTG CGCCCGGCAT CATGTCGCGG CCGATGAAGT CGCAGGCCAT GCCGGAGGTG CGCGAGGCCG CCCGCTCGGT CATGCGCGGC GAGCGCCATC CGCTCGTCGG CAACGCGATG TTCTTCCATG CCGCCAGCCA CAGGTTTTCC TATGACAACA TGCATTACGT CCTCGTCGCG GGCGGCAATG CCTTCTACGA AAAGCGCCGC CGCGAACTGG TGACGCAGCC GGTCCCGCCG CGCCCCATAG AAGGCATCAC CCGCAGATAG
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Protein sequence | MRILNARPWG GGLSLLLVLL VVAGCGIGRR HSELECMERA MFFESHRSSR DGMIAVGSVV MNRVQSRQYP NSVCAVVGQK GQFAPGIMSR PMKSQAMPEV REAARSVMRG ERHPLVGNAM FFHAASHRFS YDNMHYVLVA GGNAFYEKRR RELVTQPVPP RPIEGITRR
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