| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1864 |
|---|
| Symbol | |
|---|
| ID | 4579123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1862938 |
|---|
| End bp | 1863543 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639769184 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_915657 |
|---|
| Protein GI | 119384601 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0288491 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.532094 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAT CCCCCGACGC CTTCAGATCC ATCGGAGAGG TCTCGCGCCT CGTGGGCGTC
GCGCCGCATG TGCTGCGCTA TTGGGAATCG CAATTCACGC AGCTTGCGCC GGTGAAGCGC
GCCGATGGGC GCCGCTATTA CCGACCCGAC GATGTGCGCC TCGCCGCGGG GCTGTGCCAG
GTTCTGCGCG AGGAGGGGCT CAGCATCCGC GGCGCCAAGC GGCTGATCGG CGCCGACCGC
GGCTCGGCGC TGCGCGAGAT CGGCGCCGCA CGCCTGGGCG AGGCACAAGG CGATGCCGGG
CCGGCTGAAC GCCCCGCCCC CAGCCCGGCG GTGCGCCTGG CCCTGCCCGG CTCGGCCGAA
CCGGCAATGC CGGCAGCACC GACCCGCGCC AGGACCGTGG CAAAACCGGC CCGCCCTGCC
CCGCAACACG CCGAATCGCT GCCGCTTTTC GCGGGATTGG ATACTGGTCG CCCTTCCGCC
CCCGCAACCG ACTGGCTGGG GCGGCTGGTC GGCACCGCCA TGGCGCTGCG CCAGCACGAA
TTGCAGGGCA AGCCCCTGCC CGCCCGTGCA AAAGCCCTGC GCGACGCGCT GCACGACCGC
CGCTGA
|
|---|
| Protein sequence | MSKSPDAFRS IGEVSRLVGV APHVLRYWES QFTQLAPVKR ADGRRYYRPD DVRLAAGLCQ
VLREEGLSIR GAKRLIGADR GSALREIGAA RLGEAQGDAG PAERPAPSPA VRLALPGSAE
PAMPAAPTRA RTVAKPARPA PQHAESLPLF AGLDTGRPSA PATDWLGRLV GTAMALRQHE
LQGKPLPARA KALRDALHDR R
|
|---|
| |