Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1848 |
Symbol | |
ID | 4581032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1846445 |
End bp | 1848064 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639769168 |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | YP_915641 |
Protein GI | 119384585 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGACA CCATCAAGCT GATCGCGCTG GGCACGATCG CGGTCCTGGC CGCGATCGCG GCCAATTATG CGCGACCCGA TGATCTCGCG TATCTGGTCA ACGCCCTGAT CATCATGCTG GCGGCGGGGA TCATGTTCCT GCGCGTGCTG CGTCAGATGG GCAATGAGCA GCCTGCGCTC GAGCCGCACC CCGAAACGCA ATATATGGAC GACGTCGTCC GGGCGGGCGT GATCGCCACC GCGTTCTGGG GCGTGGTGGG CTTTCTGGTC GGGGTGGTCA TCGCCTTCCA GCTGGCCTTC CCGGCGCTGA ACCTCAGCGA CATCACCATG GGCTATACCA ATTTCGGCAA GCTTCGCCCG CTGCATACCT CGGCGGTGAT CTTCGCCTTT GGCGGCAACG CCCTGATCGC GACCTCGTTC TACGTGGTGC AGCGCACCTC GGCGGCGCGG CTCTGGGGCG GCAACGCGGC CTGGTTCGTG TTCTGGGGCT ATCAGCTCTT CATCGTTCTG GCCGCGACCG GCTACATCCT GGGCGCCACC CAGTCCAAGG AATATGCCGA GCCGGAATGG TATGTGGACT GGTGGCTGAC CGTCGTCTGG GTCGTCTACC TGGCAGTGTT CCTGGGCACG ATCCTGAAGC GGAAAGAGCC GCATATCTAT GTGGCGAACT GGTTCTACCT GTCCTTCATC GTCACCATCG CCATGCTGCA TATCGTCAAC AACCTGGCGA TCCCGGTCAG CCTCTTCGGC TCGAAATCGG TGCAGCTCTT CTCGGGCGTG CAGGACGCGA TGACGCAATG GTGGTATGGC CACAACGCGG TGGGCTTCTT CCTGACGGCG GGCTTCCTGG GCATGATGTA TTACTTCATC CCCAAGCAGG CCGAGCGTCC GGTCTACAGC TACAAGCTGT CCATCATCCA CTTCTGGGCG CTGATCTTCC TTTATATCTG GGCCGGTCCG CACCACCTGC ACTATACCGC GCTGCCCGAC TGGGCCTCGA CGCTGGGCAT GGTGTTCTCG ATCATCCTGT GGATGCCCAG CTGGGGCGGC ATGATCAACG GGCTGATGAC GCTCTCGGGC GCCTGGGACA AGCTGCGCAC CGATCCGATC ATCCGCATGA TGGTGGTGGC CGTCGGCTTC TACGGCATGG CGACCTTCGA GGGGCCGATG ATGTCGATCA AGGCGGTGAA CTCGCTGTCG CATTACACCG ACTGGACCAT CGGTCACGTC CATTCCGGCG CGCTGGGCTG GAACGGCATG ATCACCTTTG GCGCGCTCTA CTACCTGGTG CCGCGGCTTT GGGGACGTGA GCGGCTTTAT TCGACGGGGC TGGTCAGCTG GCACTTCTGG CTCGCCACCA TCGGCCTGGT GCTCTACGCG GCCTCGATGT GGGTCTCGGG CATCATGGAA GGGTTGATGT GGCGCGAGGT CGACGCCCAG GGCTTCCTGG TCAACGCCTT TGCCGACACG GTCGCCGCGA AATTCCCGAT GAACGTGGTG CGGGCCCTGG GCGGCGTGCT CTATCTCGGC GGTGCGCTGA TCATGTGCTA CAACCTGTGG GCCACCGTCG CCAAGCAGCC CAAGACCCAA TCGACCGCCG CTGCGGTTCC TGCCGAGTGA
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Protein sequence | MLDTIKLIAL GTIAVLAAIA ANYARPDDLA YLVNALIIML AAGIMFLRVL RQMGNEQPAL EPHPETQYMD DVVRAGVIAT AFWGVVGFLV GVVIAFQLAF PALNLSDITM GYTNFGKLRP LHTSAVIFAF GGNALIATSF YVVQRTSAAR LWGGNAAWFV FWGYQLFIVL AATGYILGAT QSKEYAEPEW YVDWWLTVVW VVYLAVFLGT ILKRKEPHIY VANWFYLSFI VTIAMLHIVN NLAIPVSLFG SKSVQLFSGV QDAMTQWWYG HNAVGFFLTA GFLGMMYYFI PKQAERPVYS YKLSIIHFWA LIFLYIWAGP HHLHYTALPD WASTLGMVFS IILWMPSWGG MINGLMTLSG AWDKLRTDPI IRMMVVAVGF YGMATFEGPM MSIKAVNSLS HYTDWTIGHV HSGALGWNGM ITFGALYYLV PRLWGRERLY STGLVSWHFW LATIGLVLYA ASMWVSGIME GLMWREVDAQ GFLVNAFADT VAAKFPMNVV RALGGVLYLG GALIMCYNLW ATVAKQPKTQ STAAAVPAE
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