| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1788 |
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| Symbol | |
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| ID | 4580972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1780710 |
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| End bp | 1783367 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639769106 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_915581 |
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| Protein GI | 119384525 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00597808 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCTG AAACCCTGGG CGCCGCCTCG GTCGTCTATG TCGCGCTGAT GTTCCTGCTG
GCCCATGCCG CCGACCGGGC CGCCGCCGCC GGCCGCTGGC GCTGGATGGA CCGGCCGGTG
ATCTATACGC TGTCGCTGTC GGTCTATTGC TCGGCCTGGA CCTTCTATGG CGCCGTGGGC
TACGCCACCC GCTCGGGGCT GGAGTTCCTG ACCATCTACC TTGGCCCCGG CATCGTCTTT
GCCGGGGCAT GGTGGGGCCT CAGGCGGCTG GTCCGGGTCG CGCGGCTGCA TCGCGTGACC
TCGATCGCCG ACCTCATCTC CAGCCGCTTC GGCAAGTCCG CGGGGCTTGC GGCGCTGGTG
ACGCTGATCG GCGTCCTGGC CTCGACCCCC TATATCGCGC TGCAACTGCA ATCGGTCTCG
ATGGCGCTTT CGGCATTCGC CACCAGCGGC CACCCCCTGC CCGGCAGTAT CGCGCTGTGG
GTGGCGGTCG GGCTTGCCGC CTTCGCCATC CTGTTCGGCA CCCGCAACCT GGCCGCGAAC
GAGCGCCATC ACGGCGTCGT CATCGCCATC GCCGTCGAGG CAGTGGTCAA GCTTGCCGCC
TTTCTGGCCG TCGGCGCCTA TGTGCTGTGG GGGATCGCGG ACGGGCCTGC CGACGTGCTG
GCGCGTATCG ACCGCATGGC GGTCTCGGCC GGGGGCGAGG GCTGGCTGAT CCGGCCGGAT
CGCTGGTTCA CGCTGATCGC GCTGTCCGGG GCGGCGGTGA TGGTGCTGCC GCGCATGTTC
CACGTCCTGG TGGTCGAGGC CAGCGACGAG AATCGGCTGC GCCAGGCCGG CTGGGCTTTT
CCCGCCTATC TGGCCGCCAT GTCCTTCCTG GTGCTGCCCA TCGCCGTGGT CGGCGCGGAC
CTGCTGCCCA AGGGCTCGAA CCCCGACCTT TACGTGCTGG CCCTGCCGCT GTCGCAGGGG
CGCGACACGC TGGCGGCGCT GGTGTTCCTG GGCGGCTTTT CCTCGGCCAT GTCGATGGTG
GTGGTCAGCG CCATCGCGCT GTCGACGATG ATGGCGAACC ATTGGCTGGT GCCCTTGTGG
CTCTGGCTGC GCCAGACGGC GCTGTCCGAA CCGGCGCAGG CCCGCGACGA TCTGGGCGCA
TTGATGCTGA ACGCGCGGCG GCTGGCCATC GTCTCGGTGA TCGGCGCGGG CTGGCTCTAT
CACCGCATGA CCGGGGGCAC CACCGCCCTG GCCGCCATGG GGACGGTCGC CTTTTCGGGC
ATGGCGCAGG TGCTGCCGGC CATGATCGCG GGGCTGATCT GGCGCGGCGC GACCCGGCGG
GGCGCCATCG CCGGGATCGT CGCGGGAGCG CTGATCTGGG GACGCGCGGT CTTCCTGCCC
TCGCTGGGGC TGGCCGCTCC GCCGGCATTT CCTGCCGGAA TCGATGCTTT CGCGGGGGCG
GTGCTGCTGG CGCTGGCGGT GAACCTGCTG CTTCTGGTGC TGACCTCGCT CATGGATTTC
CCCGACCCGA CCGAGCGGTT GCAGGCGCTG TCCTTCGTCC ATGCCATCGC CCCCGACGCC
GCCGCCAGCG AAACCGCCCC AGCGGTGCAG GCCGAGGCGC TGCTGACGCT GGCCGGGCGG
ATCTGGGGCA ACGAACATGC GCTGGAGGTG TTCCGCAAGG CCGCGGAAGA TCAGGGAAAA
TCCGGCTATC TTCCCGACCT GACCCCGCGC TTTCTCGCCG GGTTCGAGCG CCACCTGGCC
GGCACGGTGG GCGCGGCGAC GGCCTCGGCG CTGATGGCGC GGGTCGGCGG GCGCGGCAGC
GTCACCGTGG CCGACCTGAT GGAGGTCGCG GGCGAGGCCA GCCGCGCGCG CGAGGACAAC
CGCCGGCTGG AGATCACCTC GGCGGAACTG GCCAGAACCG CCGCCATGCT GCGGGAAAGC
AACGAGAAGC TGACCACGCT TTCCGCGCAG AAGGACGCCT TTCTCGGCCA GATCAGCCAT
GAGCTGCGCA CGCCCATGAC CTCGATCCGC GCCTTCTCCG AGATCCTGAT GGAACCGGAC
CTGCCCACCG GGGACCGTGC CCGCTTCGCC GGGATCATCC AGGACGAGGC CTGCCGCATG
ACCCGGCTGC TGGACGACCT GCTGGACCTT TCGGTGCTGG AGGCGGGCCG GGCGCAACTG
AAGCCCGGCG TCGTCAACCT GCACGACCTG ATCGGGCGCG CGCTGGCCGC CGCGGGGGCA
AGTGCGACGG GGCGCGAATT CGCCATCCGC CGCAACCCGG TCGCCGAGCA TCTGCCGGTG
ATCACCGACC CGGACCGGCT GTTGCAGGTG CTGATCAACG TCATCTCGAA CGCGCGGAAA
TATTGCGACG CCAGCGAGCC CGCGATCCGC ATCGACACCC GCCGCAACCC CCAGGGCTGG
ACCGAGATCG ACATCCACGA CAACGGCTCG GGCATCGGCC CGGAAAACCG CGCGCTGATC
TTCGAGAAAT TCGCGCGGCT GGACGATCCC TCGCGCGCCG GGGGTGCCGG GCTGGGACTG
GCGATCTGCA AGGAGATCAT GGATTTCCTG GGCGGCACGA TCGCCTATCT GCCAGGCCAG
GGCGGCGCCT GCTTTCGCAT CGCGCTGCCG CCGCGCCCAC CACGCCGCGC GGAAAATACG
GAAAATGCAG CGGGTTAA
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| Protein sequence | MTPETLGAAS VVYVALMFLL AHAADRAAAA GRWRWMDRPV IYTLSLSVYC SAWTFYGAVG
YATRSGLEFL TIYLGPGIVF AGAWWGLRRL VRVARLHRVT SIADLISSRF GKSAGLAALV
TLIGVLASTP YIALQLQSVS MALSAFATSG HPLPGSIALW VAVGLAAFAI LFGTRNLAAN
ERHHGVVIAI AVEAVVKLAA FLAVGAYVLW GIADGPADVL ARIDRMAVSA GGEGWLIRPD
RWFTLIALSG AAVMVLPRMF HVLVVEASDE NRLRQAGWAF PAYLAAMSFL VLPIAVVGAD
LLPKGSNPDL YVLALPLSQG RDTLAALVFL GGFSSAMSMV VVSAIALSTM MANHWLVPLW
LWLRQTALSE PAQARDDLGA LMLNARRLAI VSVIGAGWLY HRMTGGTTAL AAMGTVAFSG
MAQVLPAMIA GLIWRGATRR GAIAGIVAGA LIWGRAVFLP SLGLAAPPAF PAGIDAFAGA
VLLALAVNLL LLVLTSLMDF PDPTERLQAL SFVHAIAPDA AASETAPAVQ AEALLTLAGR
IWGNEHALEV FRKAAEDQGK SGYLPDLTPR FLAGFERHLA GTVGAATASA LMARVGGRGS
VTVADLMEVA GEASRAREDN RRLEITSAEL ARTAAMLRES NEKLTTLSAQ KDAFLGQISH
ELRTPMTSIR AFSEILMEPD LPTGDRARFA GIIQDEACRM TRLLDDLLDL SVLEAGRAQL
KPGVVNLHDL IGRALAAAGA SATGREFAIR RNPVAEHLPV ITDPDRLLQV LINVISNARK
YCDASEPAIR IDTRRNPQGW TEIDIHDNGS GIGPENRALI FEKFARLDDP SRAGGAGLGL
AICKEIMDFL GGTIAYLPGQ GGACFRIALP PRPPRRAENT ENAAG
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