Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1783 |
Symbol | |
ID | 4580967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1776681 |
End bp | 1778087 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639769101 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_915576 |
Protein GI | 119384520 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0029863 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCAA CCAGCCACAT CGCGGCTGCC CGGGACGCGC CGGTCCGGCG TGGGCGCTCG CATGGCGTGG CCCTGCGGCT TCTGGCGCTT GGCGGCTCGG CGCTGGCCTG GCTCGCCATG GTCGCCATCG TCGCCACGGT GCTGATCCTC AACGCCCGCA ACTCGGCCCG GGACGAGACC GGCTCGGCCT TCCAGCTGGC CAATGCCTTT GCCACGCTGC ATCTGCCCAC CGCCTTCGAG CGGCGCGACA TGATGGCCGA GGCAGCCCGC ATCGCCGCCG AGATCGAGGC GCAGCGCCAC CTGTCGGCCG AGTTGCGCGA TGCCCAGGGC CAGCCCGTGG CGCTGGCGCT GGCGCCGCGC CTGCCGCCCG GGCAGGTGCC GGAGTGGTTC GCCGCGCTGA TCCGCCCCGA GCCGCTGCAC GAACTGATCC CCATCGCGCA ATATCCCAAC GTGCTGGGCG TGCTGGAGAT CCGCACCGAT CCCCGCGACG AGATCGCCGA GGCCTGGGCG GATTTCCGGC TGATCCTGCC GCTTCTGGCC GCCATGGCGC TGGTGGCGAT CGGCGTCACC ATGGCCATCA CCGCGCTGGT GCTGCGGCGG CTGGGACTGC TGGGCGCGGC ACTGGACCGG ATGCGGGCGG GCGATCTGGA CCATCCCGCG CCGCAGACCG GGCTGGCGGA ACTGGCGGTG CTGACCGACG GCGTCAACGC GCTGGCCGCG CATCTGGCCG GAGAGCGGGC CGAGAACCGC CGCCTGCAAG GCCGGATGCT GACCCTGGCC GAGGCCGAGC GCGCCCGCAT CGCCAGCGAC CTGCATGACG GCATCGGCCC GCAGCTTTTC GCGCTGCAGG CGGCCGTGGG CCAGGCCGGC CGCGCAGCCG GGACCGGCCG CGACCCGGCG CTGGCCGAGG CGCTTTCCGC CGTCTCGCGC CACGCGCAGG CGATCCGGCA AAGCGCCCGC GCCGCCATCG ACGACCTGCG GCTGGCCCCG GCCGAGGGCG CGAGCCTTGC CGAGATGCTG CAAGAGCTGC TGATCGAATT CGCCGAGATC GCGCCCGATA CCGCCATCAC GCTGGACTGC CCGCCCGACC TGCCCGAGCC GGGCGAGGCC GGGCGGATCG CGCTTTACCG CTTCGTGCGG GAAAGCGTGC TCAACGCGCT GCGCCATGCC GCGCCCGGCG CGATCCGGGT GTCCCTGGCG CATGAGGACC ACGGCATCGC CGCCCGCGTC GCCGACGACG GCAGCGGCCC CGCCGCACCG GGCAGCCGGG CCGGGCTTGG CCAGGCCGGC ATGCGCGACC GCGCCAGCGC GCTTGGCGGG CGCTACCAGC CGCCCCGGCG CGAAGGCCCC TGGACCCTTA CCGAATGCCA CCTGCCCTGC CCGGCCGAGC AAGGATCAGC CCGATGA
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Protein sequence | MDATSHIAAA RDAPVRRGRS HGVALRLLAL GGSALAWLAM VAIVATVLIL NARNSARDET GSAFQLANAF ATLHLPTAFE RRDMMAEAAR IAAEIEAQRH LSAELRDAQG QPVALALAPR LPPGQVPEWF AALIRPEPLH ELIPIAQYPN VLGVLEIRTD PRDEIAEAWA DFRLILPLLA AMALVAIGVT MAITALVLRR LGLLGAALDR MRAGDLDHPA PQTGLAELAV LTDGVNALAA HLAGERAENR RLQGRMLTLA EAERARIASD LHDGIGPQLF ALQAAVGQAG RAAGTGRDPA LAEALSAVSR HAQAIRQSAR AAIDDLRLAP AEGASLAEML QELLIEFAEI APDTAITLDC PPDLPEPGEA GRIALYRFVR ESVLNALRHA APGAIRVSLA HEDHGIAARV ADDGSGPAAP GSRAGLGQAG MRDRASALGG RYQPPRREGP WTLTECHLPC PAEQGSAR
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