Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1712 |
Symbol | |
ID | 4581338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1697832 |
End bp | 1699442 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639769026 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_915505 |
Protein GI | 119384449 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.334858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTGTC CGATGGAAAG CTACGACTAT ATCGTGATCG GCGCGGGCAG CGCCGGCTGC GTGCTGGCAA ACCGCCTCAG CGCCGATCCC GGCAACCGCG TGCTGCTGCT CGAGGCCGGG GGGCGCGACA ATTACCACTG GATCCATATC CCGGTGGGCT ATCTCTACTG CATCGGCAAT CCGCGCACCG ACTGGGGCTT TCGCACCGAA GCCGAACCGG GGCTGAACGG CCGTGCGCTG CTTTATCCGC GCGGGCGGGT GCTGGGCGGC TGTTCCTCGA TCAACGGCAT GATCTATATG CGCGGGCAGG CGGCGGATTA CGACCATTGG CGCCAGATGG GCTGCACCGG CTGGGGCTGG GACGACGTGC TGCCGCTCTT CAAGGCGCAG GAGGACCATT ATCGCGGCGC CGACGACGTG CATGGCGCCG GCGGCGAATT GCGGGTCGAG ACGGCGCGGG TCCGCTGGGC GGTGCTCGAC GCCTTCATGG AGGCGGCGGA ACAGGCCGGC ATCCCGCGCA CCGAGGATTT CAATCGCGGC GACAACGAAG GCGGCGGCTA TTTCGACGTG ACCCAGAAAA GCGGCTGGCG CTGGAGCGCG GCCAAGGCTT TCCTGCGCCC GGTGCGCCAC CGCCAGAACC TGCGCATCCT GACCGGGGCC GAGGTCGAGC GGCTGGTGAT CGAGGCGGGC GAGGTCACGG GCGTGGTCTT TCACCACCTG GGCCAGCGGC GCGAAGTGCG CGCCGCGCGC GAGACGGTGC TGGCGGCAGG CTCCATCGGC TCGGTGCAGA TCCTCGAACA TTCCGGCGTC GGGCAGGGCG GGATATTGCA GGCCGCCGGC ATTGCCCCGC AGGTCGAGGT CCCGGGGCTG GGCGAGAACC TGCAGGACCA TCTGCAATTG CGGCTGGTCT ACAAGGTCCG GGGCGTGCCG ACGCTGAACG AAAAGGCCTC GCACCTGATG GGCAAGGCGG CGATCGGGCT GGAATACCTG CTGAAACGCT CGGGCCCGAT GTCGATGGCG CCGAGCCAGC TGGGCATCTT CACCCGCTCG GGGCCGGACA AGGCGACGCC GGACCTGGAG TTTCACGTCC AGCCGGTCAG CCTGGACAAG TTCGGCGACC CGGTGCATCC CTTCCCGGCC ATGACCGCCT CGGTCTGCAA CCTGCGGCCG GAAAGCCGCG GTTCGGTCCA TGTCGCCGGG CCGGATTTCC GCGCCCATCC CGCGATCCGG CCGAACTACC TTTCGACCGA GGCCGACCGC GAGGTGGCCA TGCGCGCCGT CCGCCTGACC CGCAAGATCG CCGCGCAGCC GGCCTTCAAC CGCTTCGACC CCGAGGAGCA TATCCCCGGC ATCGCCTTCC AGAGCGACGA GGATCTGGTC CGCGCTGCCG GCGATATCGG CACCACGATC TTCCACCCGG TCGGCACCTG CCGCATGGGC GCCGACGAGG GCGCGGTGGT CGATCCGCGG CTGCGGATGC GCGCGCTTGG CCGGCTGCGG ATCGCCGATG CCTCGGTCAT GCCGACGATC ACCAGCGGCA ACACCAACGC GCCGGCGATG ATGATCGCCG AAAAGGCCGC GCGGATGATG CTGGAGGATG CGAGGGGTTG A
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Protein sequence | MECPMESYDY IVIGAGSAGC VLANRLSADP GNRVLLLEAG GRDNYHWIHI PVGYLYCIGN PRTDWGFRTE AEPGLNGRAL LYPRGRVLGG CSSINGMIYM RGQAADYDHW RQMGCTGWGW DDVLPLFKAQ EDHYRGADDV HGAGGELRVE TARVRWAVLD AFMEAAEQAG IPRTEDFNRG DNEGGGYFDV TQKSGWRWSA AKAFLRPVRH RQNLRILTGA EVERLVIEAG EVTGVVFHHL GQRREVRAAR ETVLAAGSIG SVQILEHSGV GQGGILQAAG IAPQVEVPGL GENLQDHLQL RLVYKVRGVP TLNEKASHLM GKAAIGLEYL LKRSGPMSMA PSQLGIFTRS GPDKATPDLE FHVQPVSLDK FGDPVHPFPA MTASVCNLRP ESRGSVHVAG PDFRAHPAIR PNYLSTEADR EVAMRAVRLT RKIAAQPAFN RFDPEEHIPG IAFQSDEDLV RAAGDIGTTI FHPVGTCRMG ADEGAVVDPR LRMRALGRLR IADASVMPTI TSGNTNAPAM MIAEKAARMM LEDARG
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