Gene Pden_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1678 
Symbol 
ID4580086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1660053 
End bp1661063 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content68% 
IMG OID639768992 
Productinositol 2-dehydrogenase 
Protein accessionYP_915471 
Protein GI119384415 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0187715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.830597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGA AGATCGGAGT GATCGGCACC GGCGCCATCG GCCAGGACCA TACCCGGCGC 
ATCAACCAGG TCCTGGCCGG CGCCAGGGTC GCGGCGCTGA ACGACGTGAA CCGTGCCAAT
GCCGAGGCCT GCCAGCGCGA CCATGCCCCC GAGGCGCGGA TCTTCGACGA CCCGCATGCG
CTGATCCGCG ATGCCGAGGT GGATGCGATC CTCGTCTGTT CCTGGGGCCA GACGCATGAG
GAATACGTGC TGGCCGCCAT CGCCGCCGGC AAGCCGTGCT TTTGCGAAAA GCCGCTGGCC
ACCACCGCCG AAGGCGCGCG CCGCATCGTC GAGGCCGAAG AAGCGGCCGG CAAGCGGCTG
GTGCAGGTCG GCTTCATGCG CCGCTACGAT CCGGGCTATG TCGCGCTGAA AAAGGCGGTG
GCCGAGGTGA CCGGCGCGCC GCTGATGGTG CATGCCGCGC ATCGCAATCC GCGGGTGGGC
GAGAACTACC TGACCCCGAT GGCGATCCAC GACACGCTGA TCCACGAGAT CGACGTGCTG
CGCTGGCTGC TCGACGACGA CTATGTCGGC GCCCGGGTGC TCTTCCCGCG CAAGTCGCCG
CGCGCCCATG AAAAGCTGCG CGACCCGCAG GTGGTGGTGC TGGAGACTGC CCGGGGCGTG
GTGATCGATG TCGAGGTCTT TGTGAACTGC CATTACGGCT ACGACATCCA GTGCGAGATC
GTGGGCGAGG ACGGCATCGC CCGGCTGCCC GAGCCGATGG GCATCCAGAC CCGTTCGGGC
GCGGTGCTTG GCCAGCCGAT CCTGATGGAC TGGAAGGACC GCTTCATCGA CAGCTACGAC
TATGAACTGG CCGATTTCCT GAAGGCCGCC GCCAGGGGCA CCGCCGCCGG CCCGACCGCC
TGGGACGGCT ATGTCGCCGC GGTCACCGCC GATGCCTGCG TTGCCGCGCA GGAAGCCGGG
GGCGAGTCCG TCGCGATCGA ACTGCCCGCC CGTCCCGCCC TTTACGCCTG A
 
Protein sequence
MTLKIGVIGT GAIGQDHTRR INQVLAGARV AALNDVNRAN AEACQRDHAP EARIFDDPHA 
LIRDAEVDAI LVCSWGQTHE EYVLAAIAAG KPCFCEKPLA TTAEGARRIV EAEEAAGKRL
VQVGFMRRYD PGYVALKKAV AEVTGAPLMV HAAHRNPRVG ENYLTPMAIH DTLIHEIDVL
RWLLDDDYVG ARVLFPRKSP RAHEKLRDPQ VVVLETARGV VIDVEVFVNC HYGYDIQCEI
VGEDGIARLP EPMGIQTRSG AVLGQPILMD WKDRFIDSYD YELADFLKAA ARGTAAGPTA
WDGYVAAVTA DACVAAQEAG GESVAIELPA RPALYA